RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 THAP1Q9NVV9 213 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 TRPM5Q9NZQ8 1165 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 PTPRSQ13332 1948 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 GLDCP23378 1020 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 ZNF460Q14592 562 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 USP10Q14694 798 aaKnown RBP19.32■□□□□ 0.68
SMPD3-203ENST00000563226 CCDC153Q494R4 210 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 ZNF470Q6ECI4 717 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 KLHDC10Q6PID8 442 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 C1QTNF1Q9BXJ1 281 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 HEATR9A2RTY3 570 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 CCL22O00626 93 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 SIN3BO75182 1162 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 CPA3P15088 417 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 CSF2RAP15509 400 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 ALDH1A3P47895 512 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 SLC1A6P48664 564 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 GNA12Q03113 381 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 TWF1Q12792 350 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 ITGA9Q13797 1035 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 BTG3Q14201 252 aaPredicted RBP19.31■□□□□ 0.68
SMPD3-203ENST00000563226 ZNF235Q14590 738 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 LRRC26Q2I0M4 334 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 TSTD2Q5T7W7 516 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 TPGS2Q68CL5 300 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 RAPH1Q70E73 1250 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 C2CD4AQ8NCU7 369 aaPredicted RBP19.31■□□□□ 0.68
SMPD3-203ENST00000563226 OR13J1Q8NGT2 312 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 PLD4Q96BZ4 506 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 BEGAINQ9BUH8 593 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 PRKD2Q9BZL6 878 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 KCNK4Q9NYG8 393 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 OBSL1O75147 1896 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 G3V2L1 256 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 SCAMP3O14828 347 aaKnown RBP19.31■□□□□ 0.68
SMPD3-203ENST00000563226 TSPAN3O60637 253 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 SERPINE1P05121 402 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 SLC35E2BP0CK96 405 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 AQP5P55064 265 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 MTA1Q13330 715 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 THOC5Q13769 683 aaKnown RBP19.31■□□□□ 0.68
SMPD3-203ENST00000563226 CEP97Q8IW35 865 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 SLC7A6OSQ96CW6 309 aaPredicted RBP19.31■□□□□ 0.68
SMPD3-203ENST00000563226 RANBP9Q96S59 729 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 SORT1Q99523 831 aa19.31■□□□□ 0.68
SMPD3-203ENST00000563226 POLR1EQ9GZS1 481 aaKnown RBP19.31■□□□□ 0.68
SMPD3-203ENST00000563226 LOC285095A0A1B0GVY8 99 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 ABHD14A-ACY1A0A1B0GW23 586 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 FAM95CA0A1B0GW59 222 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 DNAJC6O75061 913 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 HAUS5O94927 633 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 RALBP11234 206 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 PAMP19021 973 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 CDH4P55283 916 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 ZBTB16Q05516 673 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 TAF12Q16514 161 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 ZNF789Q5FWF6 425 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 IL31Q6EBC2 164 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 CCDC91Q7Z6B0 441 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 TMEM150AQ86TG1 271 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 PARP9Q8IXQ6 854 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 UTP4Q969X6 686 aaKnown RBP19.3■□□□□ 0.68
SMPD3-203ENST00000563226 NSMCE3Q96MG7 304 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 SPON2Q9BUD6 331 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 KLF16Q9BXK1 252 aaPredicted RBP19.3■□□□□ 0.68
SMPD3-203ENST00000563226 NMRAL1Q9HBL8 299 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 ARL8BQ9NVJ2 186 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 SMPD4Q9NXE4 827 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 HSFX1Q9UBD0 423 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 AGO1Q9UL18 857 aaKnown RBP19.3■□□□□ 0.68
SMPD3-203ENST00000563226 DNAJC16Q9Y2G8 782 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 KCTD3Q9Y597 815 aa19.3■□□□□ 0.68
SMPD3-203ENST00000563226 PRRG1O14668 218 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 MGRN1O60291 552 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 ARSDP51689 593 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 WDR5P61964 334 aaKnown RBP19.29■□□□□ 0.68
SMPD3-203ENST00000563226 RAB33AQ14088 237 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 UGP2Q16851 508 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 SPDYAQ5MJ70 313 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 RABGAP1LQ5R372 815 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 NEPROQ6NW34 567 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 OR6Y1Q8NGX8 325 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 KCTD4Q8WVF5 259 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 TRMT2BQ96GJ1 504 aaKnown RBP19.29■□□□□ 0.68
SMPD3-203ENST00000563226 SLC22A12Q96S37 553 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 NMUR2Q9GZQ4 415 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 MAGEH1Q9H213 219 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 LRMDAQ9H2I8 198 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 ZNF334Q9HCZ1 680 aaPredicted RBP19.29■□□□□ 0.68
SMPD3-203ENST00000563226 CPSF2Q9P2I0 782 aaKnown RBP19.29■□□□□ 0.68
SMPD3-203ENST00000563226 FBXO5Q9UKT4 447 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 TRIM43BA6NCK2 446 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 A8MUI8 341 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.29■□□□□ 0.68
SMPD3-203ENST00000563226 FCHO1O14526 889 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 URODP06132 367 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 SBK3P0C264 359 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 ACRP10323 421 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 RFC2P35250 354 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 HADHAP40939 763 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms