RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 HLFQ16534 295 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 KIF19Q2TAC6 998 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 AP5B1Q2VPB7 878 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 SYTL3Q4VX76 610 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 FNBP1LQ5T0N5 605 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 NCAPH2Q6IBW4 605 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 HEPHL1Q6MZM0 1159 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 HERC6Q8IVU3 1022 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 SUGP1Q8IWZ8 645 aaKnown RBP3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 HORMAD2Q8N7B1 307 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 URB1-AS1Q96HZ7 61 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 IGSF21Q96ID5 467 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 ZSCAN31Q96LW9 406 aaPredicted RBP3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 COG8Q96MW5 612 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 SCLT1Q96NL6 688 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 NPLQ9BXD5 320 aaPredicted RBP3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 SPRY4Q9C004 299 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 KLHL31Q9H511 634 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 GRHL1Q9NZI5 618 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 CD207Q9UJ71 328 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 C17orf100A8MU93 164 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 MS4A18H0YCH9 400 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 CBX6O95503 412 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 IL1AP01583 271 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 SNRNP70P08621 437 aaKnown RBP3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 WEE2P0C1S8 567 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 ENO3P13929 434 aaPredicted RBP3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 HSD3B1P14060 373 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 RFC1P35251 1148 aaPredicted RBP3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 CCT5P48643 541 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 TMPRSS3P57727 454 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 SELENOVP59797 346 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 ZP1P60852 638 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 RBM39Q14498 530 aaKnown RBP3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 DUSP6Q16828 381 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 DCAF12L2Q5VW00 463 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 PMS2CLQ68D20 193 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 GJB7Q6PEY0 223 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 SERPINA11Q86U17 422 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 TMC8Q8IU68 726 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 GHDCQ8N2G8 530 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 RFLNBQ8N5W9 214 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 ENGASEQ8NFI3 743 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 SLC35F5Q8WV83 523 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 RNFT2Q96EX2 444 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 NODALQ96S42 347 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 CTDSP1Q9GZU7 261 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 TTC12Q9H892 705 aaPredicted RBP3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 SEL1LQ9UBV2 794 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 PLEKHB1Q9UF11 243 aaPredicted RBP3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 WDR81Q562E7 1941 aa3.31□□□□□ -1.88
HDGFL3-202ENST00000562702 DCAF1Q9Y4B6 1507 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 A0A096LPK6 155 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 VWA3AA6NCI4 1184 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 BECN2A8MW95 431 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 VWA5AO00534 786 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 PEX12O00623 359 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 KLK10O43240 276 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 DHX16O60231 1041 aaKnown RBP3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 EIF3JO75822 258 aaKnown RBP3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 F7P08709 466 aaPredicted RBP3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 HNF1BP35680 557 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 DPP6P42658 865 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 GPR12P47775 334 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 CDH12P55289 794 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 TBL3Q12788 808 aaKnown RBP3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 SLC12A1Q13621 1099 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 PKP1Q13835 747 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 PLCB4Q15147 1175 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 ZRSR2Q15696 482 aaKnown RBP3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 TDRD12Q587J7 1177 aaKnown RBP3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 SH2D4BQ5SQS7 431 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 MAP3K21Q5TCX8 1036 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 TBC1D9BQ66K14 1250 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 TMEM71Q6P5X7 295 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 ZNF449Q6P9G9 518 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 PALB2Q86YC2 1186 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 SETD9Q8NE22 299 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 CEP76Q8TAP6 659 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 TMEM163Q8TC26 289 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 MORC4Q8TE76 937 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 GCC1Q96CN9 775 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 TWNKQ96RR1 684 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 PSMD1Q99460 953 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 CD180Q99467 661 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 POLDIP3Q9BY77 421 aaKnown RBP3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 STN1Q9H668 368 aaKnown RBP3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 DDX31Q9H8H2 851 aaKnown RBP3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 ENTPD7Q9NQZ7 604 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 TLR8Q9NR97 1041 aaKnown RBP3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 CNPY2Q9Y2B0 182 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 GPR52Q9Y2T5 361 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 CLDN16Q9Y5I7 305 aa3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 SRPRBQ9Y5M8 271 aaKnown RBP3.3□□□□□ -1.88
HDGFL3-202ENST00000562702 DGKBQ9Y6T7 804 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms