RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 SPATC1Q76KD6 591 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 NIPA1Q7RTP0 329 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 DGLUCYQ7Z3D6 616 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 VN1R5Q7Z5H4 357 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 GLRX5Q86SX6 157 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 SLC22A16Q86VW1 577 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 DNAAF5Q86Y56 855 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 PLCZ1Q86YW0 608 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 ARHGEF19Q8IW93 802 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 PM20D2Q8IYS1 436 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 TBC1D21Q8IYX1 336 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 MCOLN2Q8IZK6 566 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 DHRSXQ8N5I4 330 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 OR6F1Q8NGZ6 308 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 SETD6Q8TBK2 473 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 CIDECQ96AQ7 238 aaPredicted RBP7.34□□□□□ -1.23
CDH1-203ENST00000561751 SCARF2Q96GP6 870 aaPredicted RBP7.34□□□□□ -1.23
CDH1-203ENST00000561751 DEPDC7Q96QD5 511 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 SLC29A1Q99808 456 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 CNPY3Q9BT09 278 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 TMEM168Q9H0V1 697 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 MMP27Q9H306 513 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 DPEP3Q9H4B8 488 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 EPS8L2Q9H6S3 715 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 UBE2TQ9NPD8 197 aaPredicted RBP7.34□□□□□ -1.23
CDH1-203ENST00000561751 IL17RBQ9NRM6 502 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.34□□□□□ -1.23
CDH1-203ENST00000561751 RAB20Q9NX57 234 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 LRP2BPQ9P2M1 347 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 HMGXB4Q9UGU5 601 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 ANAPC7Q9UJX3 599 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 VPS4AQ9UN37 437 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 VWA7Q9Y334 891 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 COQ4Q9Y3A0 265 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 NAALAD2Q9Y3Q0 740 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 DNMT3AQ9Y6K1 912 aaPredicted RBP7.34□□□□□ -1.23
CDH1-203ENST00000561751 TNRC6CQ9HCJ0 1690 aaKnown RBP7.34□□□□□ -1.23
CDH1-203ENST00000561751 BRCA1P38398 1863 aaKnown RBP7.34□□□□□ -1.23
CDH1-203ENST00000561751 ARPC4-TTLL3A0A0A6YYG9 625 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 MYOCOSA0A1B0GUC4 107 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 A0A1W2PQ67 120 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 TCRBV9S1A1TA0A576 114 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 FAM170AA1A519 330 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 TSPY2A6NKD2 308 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 ERVV-1B6SEH8 477 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 C9IYK1 514 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 TRIM77I1YAP6 450 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 POLRMTO00411 1230 aaKnown RBP7.33□□□□□ -1.24
CDH1-203ENST00000561751 NOP56O00567 594 aaKnown RBP7.33□□□□□ -1.24
CDH1-203ENST00000561751 GAS7O60861 476 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 KCNJ13O60928 360 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 BCAS1O75363 584 aaPredicted RBP7.33□□□□□ -1.24
CDH1-203ENST00000561751 TRIM3O75382 744 aaPredicted RBP7.33□□□□□ -1.24
CDH1-203ENST00000561751 KATNA1O75449 491 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 CDK14O94921 469 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 SLITRK5O94991 958 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 GABARAPO95166 117 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 GNRH1P01148 92 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 APOA1P02647 267 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 HMGN1P05114 100 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 S100A6P06703 90 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 UMPSP11172 480 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 FGF3P11487 239 aaPredicted RBP7.33□□□□□ -1.24
CDH1-203ENST00000561751 GFAPP14136 432 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 CYP11B1P15538 503 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 MATN1P21941 496 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 CES1P23141 567 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 BDNFP23560 247 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 PIK3R1P27986 724 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 SSTR1P30872 391 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 TALDO1P37837 337 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 RPS5P46782 204 aaKnown RBP7.33□□□□□ -1.24
CDH1-203ENST00000561751 CTSWP56202 376 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 TGFB2P61812 414 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 COPZ1P61923 177 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 ADARB1P78563 741 aaKnown RBP7.33□□□□□ -1.24
CDH1-203ENST00000561751 MS4A2Q01362 244 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 IFITM3Q01628 133 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 ART3Q13508 389 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 ATP6AP1Q15904 470 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 TAZQ16635 292 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 FASTKD1Q53R41 847 aaKnown RBP7.33□□□□□ -1.24
CDH1-203ENST00000561751 MDH1BQ5I0G3 518 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 SAMD4BQ5PRF9 694 aaKnown RBP7.33□□□□□ -1.24
CDH1-203ENST00000561751 BRMS1LQ5PSV4 323 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 RSBN1Q5VWQ0 802 aaPredicted RBP7.33□□□□□ -1.24
CDH1-203ENST00000561751 RINT1Q6NUQ1 792 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 LETMD1Q6P1Q0 360 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 METTL2BQ6P1Q9 378 aaKnown RBP7.33□□□□□ -1.24
CDH1-203ENST00000561751 NEK5Q6P3R8 708 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 TAS1R3Q7RTX0 852 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 POLNQ7Z5Q5 900 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 GALNT7Q86SF2 657 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 C14orf80Q86SX3 495 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 OSTM1Q86WC4 334 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 FBXO11Q86XK2 927 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 WDR49Q8IV35 697 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 SCML4Q8N228 414 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 KIAA1958Q8N8K9 716 aa7.33□□□□□ -1.24
CDH1-203ENST00000561751 HIPK4Q8NE63 616 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms