RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 SLC45A4Q5BKX6 768 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 ZNF805Q5CZA5 627 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 AGBL4Q5VU57 503 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 LAIR1Q6GTX8 287 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 NEK5Q6P3R8 708 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 NCEH1Q6PIU2 408 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 GDPD4Q6W3E5 623 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 ERN2Q76MJ5 926 aaKnown RBP9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 HDDC3Q8N4P3 179 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 FAM160A2Q8N612 972 aaPredicted RBP9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 CNTD1Q8N815 330 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 CCNYQ8ND76 341 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 ACTL9Q8TC94 416 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 TFB1MQ8WVM0 346 aaKnown RBP9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 RAB7BQ96AH8 199 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 ARRDC3Q96B67 414 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 ECHDC3Q96DC8 303 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 ERLEC1Q96DZ1 483 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 TOE1Q96GM8 510 aaKnown RBP9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 PPP1R16AQ96I34 528 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 VAT1Q99536 393 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 OMDQ99983 421 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 HEMGNQ9BXL5 484 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 FRMD8P1Q9BZ68 369 aaPredicted RBP9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 BTBD1Q9H0C5 482 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 NEUROG2Q9H2A3 272 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 SUV39H2Q9H5I1 410 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 RBM22Q9NW64 420 aaKnown RBP eCLIP9.75□□□□□ -0.854e-8■■■■□ 23.7
RABGGTA-221ENST00000561055 TRMT1Q9NXH9 659 aaKnown RBP9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 SERGEFQ9UGK8 458 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 CYP8B1Q9UNU6 501 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 SCN8AQ9UQD0 1980 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 MYO15AQ9UKN7 3530 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 FAM186AA6NE01 2351 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 BCLAF3A2AJT9 711 aaKnown RBP9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 METTL12A8MUP2 240 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 KPNA3O00505 521 aaPredicted RBP9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 CES2O00748 559 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 TRAFD1O14545 582 aaPredicted RBP9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 HTRA2O43464 458 aaPredicted RBP9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 PLRG1O43660 514 aaKnown RBP9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 KIF5CO60282 957 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 SOCS5O75159 536 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 NDUFS2O75306 463 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 LMNAP02545 664 aaKnown RBP9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 DPP6P42658 865 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 TAS2R38P59533 333 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 OTUD4Q01804 1114 aaKnown RBP9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 AP1B1Q10567 949 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 LLGL1Q15334 1064 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 ELF2Q15723 593 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 TEX44Q53QW1 395 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 HS1BP3Q53T59 392 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 PIP5KL1Q5T9C9 394 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 SEL1L2Q5TEA6 688 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 PEAR1Q5VY43 1037 aaPredicted RBP9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 BRAT1Q6PJG6 821 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 CEP68Q76N32 757 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 LPCAT2Q7L5N7 544 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 ZSCAN30Q86W11 494 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 SLC13A5Q86YT5 568 aaPredicted RBP9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 RASGEF1CQ8N431 466 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 OR2T34Q8NGX1 318 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 SLC35B2Q8TB61 432 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 ARRDC2Q8TBH0 407 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 GRIN3AQ8TCU5 1115 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 DNASE2BQ8WZ79 361 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 FOXJ1Q92949 421 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 NKD2Q969F2 451 aaPredicted RBP9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 TADA1Q96BN2 335 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 PBKQ96KB5 322 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 EXOC2Q96KP1 924 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 NSMCE3Q96MG7 304 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 QKIQ96PU8 341 aaKnown RBP eCLIP9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 POLR1EQ9GZS1 481 aaKnown RBP9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 ZDHHC6Q9H6R6 413 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 ATP13A3Q9H7F0 1226 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 USP29Q9HBJ7 922 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 FAM86C1Q9NVL1 165 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 TTC7AQ9ULT0 858 aaPredicted RBP9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 INVSQ9Y283 1065 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 PPIL1Q9Y3C6 166 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 PCDHGA5Q9Y5G8 931 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 PCDH15Q96QU1 1955 aa9.74□□□□□ -0.85
RABGGTA-221ENST00000561055 KNL1Q8NG31 2342 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 RIF1Q5UIP0 2472 aaKnown RBP9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 C16orf96A6NNT2 1141 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 KCNK1O00180 336 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 KCNK3O14649 394 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 AREL1O15033 823 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 MAP3K13O43283 966 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 LATO43561 262 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 FZD6O60353 706 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 RNASEH2AO75792 299 aaKnown RBP9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 SEMA4FO95754 770 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 JCHAINP01591 159 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 HLA-DQB2P05538 268 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 UGT2B4P06133 528 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 RBP3P10745 1247 aa9.73□□□□□ -0.85
RABGGTA-221ENST00000561055 ADRB3P13945 408 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms