RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 ZNF419Q96HQ0 510 aaPredicted RBP5.58□□□□□ -1.52
ZEB1-220ENST00000560909 ZFYVE19Q96K21 471 aa5.58□□□□□ -1.52
ZEB1-220ENST00000560909 RUNDC3BQ96NL0 473 aa5.58□□□□□ -1.52
ZEB1-220ENST00000560909 ASB2Q96Q27 587 aa5.58□□□□□ -1.52
ZEB1-220ENST00000560909 LGMNQ99538 433 aa5.58□□□□□ -1.52
ZEB1-220ENST00000560909 BBS2Q9BXC9 721 aa5.58□□□□□ -1.52
ZEB1-220ENST00000560909 EBF3Q9H4W6 596 aa5.58□□□□□ -1.52
ZEB1-220ENST00000560909 C8orf33Q9H7E9 229 aaPredicted RBP5.58□□□□□ -1.52
ZEB1-220ENST00000560909 SCHIP1Q9P0W5 487 aaPredicted RBP5.58□□□□□ -1.52
ZEB1-220ENST00000560909 FEZ2Q9UHY8 353 aaPredicted RBP5.58□□□□□ -1.52
ZEB1-220ENST00000560909 IPO11Q9UI26 975 aaKnown RBP5.58□□□□□ -1.52
ZEB1-220ENST00000560909 HS3ST2Q9Y278 367 aa5.58□□□□□ -1.52
ZEB1-220ENST00000560909 HELZP42694 1942 aaKnown RBP5.58□□□□□ -1.52
ZEB1-220ENST00000560909 VCANP13611 3396 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 GOLGA6L10A0A0M3HER8 536 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 TYW5A2RUC4 315 aaKnown RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 CTAGE15A4D2H0 777 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 NEDD8-MDP1E9PL57 170 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 F8W735 103 aaPredicted RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 H0Y626 953 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 J3KR12 359 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 PPP1R12AO14974 1030 aaPredicted RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 MCF2LO15068 1137 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 TRIM24O15164 1050 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 TP73O15350 636 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 ZNF821O75541 412 aaPredicted RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 ASLP04424 464 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 RHOCP08134 193 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 CTAGE8P0CG41 777 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 PABPC1P11940 636 aaKnown RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 HNRNPLP14866 589 aaKnown RBP eCLIP5.57□□□□□ -1.523e-11■■□□□ 14.4
ZEB1-220ENST00000560909 VAV1P15498 845 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 CR2P20023 1033 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 CSKP41240 450 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 GRIA2P42262 883 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 TNFRSF4P43489 277 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 SLC6A11P48066 632 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 CSNK1DP48730 415 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 EPHA4P54764 986 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 DRG2P55039 364 aaKnown RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 EIF3EP60228 445 aaKnown RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 DYNLT1P63172 113 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 ARF5P84085 180 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 LMNB2Q03252 620 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 SULT2A1Q06520 285 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 NSUN2Q08J23 767 aaKnown RBP eCLIP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 SFSWAPQ12872 951 aaKnown RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 CDH18Q13634 790 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 DHX34Q14147 1143 aaKnown RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 GRM2Q14416 872 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 GLE1Q53GS7 698 aaKnown RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 TEX44Q53QW1 395 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 TMEM196Q5HYL7 178 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 PITRM1Q5JRX3 1037 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 CCDC181Q5TID7 509 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 RNF219Q5W0B1 726 aaPredicted RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 TIGD7Q6NT04 549 aaPredicted RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 PSAPL1Q6NUJ1 521 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 C4orf22Q6V702 233 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 ARHGAP36Q6ZRI8 547 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 TPGS1Q6ZTW0 290 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 CTAGE6Q86UF2 777 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 CDKL3Q8IVW4 592 aaPredicted RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 MFN1Q8IWA4 741 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 CTAGE4Q8IX94 777 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 YAF2Q8IY57 180 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 CCDC13Q8IYE1 715 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 APCDD1Q8J025 514 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 AHI1Q8N157 1196 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 DEPDC4Q8N2C3 294 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 CNTD1Q8N815 330 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 NOA1Q8NC60 698 aaKnown RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 OR7D4Q8NG98 312 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 TFB1MQ8WVM0 346 aaKnown RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 C1orf54Q8WWF1 131 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 HTR3CQ8WXA8 447 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 ATG4AQ8WYN0 398 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 EZH1Q92800 747 aaPredicted RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 MAGOHBQ96A72 148 aaKnown RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 HAUS1Q96CS2 278 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 MYO19Q96H55 970 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 CELF6Q96J87 481 aaKnown RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 CAPZA3Q96KX2 299 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 MRGPRX3Q96LB0 322 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 TEKT5Q96M29 485 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 PSKH2Q96QS6 385 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 XPO6Q96QU8 1125 aaKnown RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 VAT1Q99536 393 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 C2orf49Q9BVC5 232 aaPredicted RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 AP1M1Q9BXS5 423 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 DDX47Q9H0S4 455 aaKnown RBP5.57□□□□□ -1.52
ZEB1-220ENST00000560909 BRD9Q9H8M2 597 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 ABCB8Q9NUT2 735 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 ZNF358Q9NW07 568 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 ELOVL2Q9NXB9 296 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 PLK2Q9NYY3 685 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 GTSE1Q9NYZ3 720 aa5.57□□□□□ -1.52
ZEB1-220ENST00000560909 DEC1Q9P2X7 70 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms