RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 EHBP1Q8NDI1 1231 aa18.11■□□□□ 0.49
TSPAN3-208ENST00000560514 OR7D4Q8NG98 312 aa18.11■□□□□ 0.49
TSPAN3-208ENST00000560514 OR6C4Q8NGE1 309 aa18.11■□□□□ 0.49
TSPAN3-208ENST00000560514 LMO3Q8TAP4 145 aa18.11■□□□□ 0.49
TSPAN3-208ENST00000560514 TMEM159Q96B96 161 aa18.11■□□□□ 0.49
TSPAN3-208ENST00000560514 KREMEN1Q96MU8 473 aa18.11■□□□□ 0.49
TSPAN3-208ENST00000560514 CLPBQ9H078 707 aa18.11■□□□□ 0.49
TSPAN3-208ENST00000560514 LRRN3Q9H3W5 708 aa18.11■□□□□ 0.49
TSPAN3-208ENST00000560514 SYNCQ9H7C4 482 aa18.11■□□□□ 0.49
TSPAN3-208ENST00000560514 ATP13A1Q9HD20 1204 aa18.11■□□□□ 0.49
TSPAN3-208ENST00000560514 GEMIN8Q9NWZ8 242 aaKnown RBP18.11■□□□□ 0.49
TSPAN3-208ENST00000560514 HECAQ9UBI9 543 aaPredicted RBP18.11■□□□□ 0.49
TSPAN3-208ENST00000560514 CNTN6Q9UQ52 1028 aa18.11■□□□□ 0.49
TSPAN3-208ENST00000560514 PAXBP1Q9Y5B6 917 aa18.11■□□□□ 0.49
TSPAN3-208ENST00000560514 SCN8AQ9UQD0 1980 aa18.11■□□□□ 0.49
TSPAN3-208ENST00000560514 C16orf96A6NNT2 1141 aa18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 TOR1BO14657 336 aa18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 PSMA7O14818 248 aa18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 EIF4A3P38919 411 aaKnown RBP18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 PNOCQ13519 176 aa18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 BRMS1LQ5PSV4 323 aa18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 GKN2Q86XP6 184 aa18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 KYQ8NBH2 561 aa18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 PCDH19Q8TAB3 1148 aa18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 CEP63Q96MT8 703 aa18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 CMKLR1Q99788 373 aa18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 TM6SF2Q9BZW4 377 aa18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 ADNPQ9H2P0 1102 aa18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 UBE2TQ9NPD8 197 aaPredicted RBP18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 MPP6Q9NZW5 540 aa18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 GPR34Q9UPC5 381 aa18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 FCF1Q9Y324 198 aaKnown RBP18.1■□□□□ 0.49
TSPAN3-208ENST00000560514 PRAMEF33A0A0G2JMD5 474 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 ILVBLA1L0T0 632 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 AGRPO00253 132 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 PRAMEF10O60809 474 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 DAB1O75553 588 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 TM7SF2O76062 418 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 ITIH1P19827 911 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 IGFALSP35858 605 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 ABL2P42684 1182 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 MAPK10P53779 464 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 CYP4F2P78329 520 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 ZNF805Q5CZA5 627 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 ACBD5Q5T8D3 534 aaPredicted RBP18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 TMEM164Q5U3C3 297 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 ZNF783Q6ZMS7 281 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 ZFAND4Q86XD8 727 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 PTRH1Q86Y79 214 aaKnown RBP18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 HID1Q8IV36 788 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 CXorf40AQ8TE69 158 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 CENPTQ96BT3 561 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 GSDMAQ96QA5 445 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 CPXM1Q96SM3 734 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 ARHGEF38Q9NXL2 777 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 RRN3Q9NYV6 651 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 AKAP7Q9P0M2 348 aaPredicted RBP18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 RABGEF1Q9UJ41 708 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 STAP1Q9ULZ2 295 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 ITM2BQ9Y287 266 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 GTF3C3Q9Y5Q9 886 aa18.09■□□□□ 0.49
TSPAN3-208ENST00000560514 BSNQ9UPA5 3926 aa18.08■□□□□ 0.49
TSPAN3-208ENST00000560514 A0A1W2PQM1 296 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 DRGXA6NNA5 263 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 SRGAP2O75044 1071 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 ZNF821O75541 412 aaPredicted RBP18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 SMC2O95347 1197 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 CD82P27701 267 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 HTR1BP28222 390 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 USP8P40818 1118 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 HK3P52790 923 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 MORC3Q14149 939 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 TCEA2Q15560 299 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 FAM183BPQ6ZVS7 135 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 RD3Q7Z3Z2 195 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 CCNJLQ8IV13 435 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 Q8N9G6 341 aaPredicted RBP18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 USP7Q93009 1102 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 EDEM3Q9BZQ6 932 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 INTS2Q9H0H0 1204 aaKnown RBP18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 GOLPH3LQ9H4A5 285 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 PIGVQ9NUD9 493 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 GGT7Q9UJ14 662 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 SNX10Q9Y5X0 201 aa18.08■□□□□ 0.48
TSPAN3-208ENST00000560514 A0A1W2PQC6 194 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 TMEM110-MUSTN1A8MSY1 372 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 KRIT1O00522 736 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 RASGRP1O95267 797 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 F9P00740 461 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 CELA2BP08218 269 aaPredicted RBP18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 CXCR3P49682 368 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 SULT1E1P49888 294 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 SLC6A3Q01959 620 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 BECN1Q14457 450 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 CLCA4Q14CN2 919 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 POLD3Q15054 466 aaPredicted RBP18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 BORAQ6PGQ7 559 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 ENOSF1Q7L5Y1 443 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 TTC7BQ86TV6 843 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 PASD1Q8IV76 773 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms