RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 SIGLEC6O43699 453 aa17.99■□□□□ 0.47
HDDC3-205ENST00000559898 DGKAP23743 735 aa17.99■□□□□ 0.47
HDDC3-205ENST00000559898 AKT2P31751 481 aa17.99■□□□□ 0.47
HDDC3-205ENST00000559898 PRKCIP41743 596 aa17.99■□□□□ 0.47
HDDC3-205ENST00000559898 ZNF805Q5CZA5 627 aa17.99■□□□□ 0.47
HDDC3-205ENST00000559898 PTAR1Q7Z6K3 402 aaPredicted RBP17.99■□□□□ 0.47
HDDC3-205ENST00000559898 PROSER1Q86XN7 944 aa17.99■□□□□ 0.47
HDDC3-205ENST00000559898 PLPP6Q8IY26 295 aa17.99■□□□□ 0.47
HDDC3-205ENST00000559898 NPWQ8N729 165 aa17.99■□□□□ 0.47
HDDC3-205ENST00000559898 DHX35Q9H5Z1 703 aaKnown RBP17.99■□□□□ 0.47
HDDC3-205ENST00000559898 PDFQ9HBH1 243 aa17.99■□□□□ 0.47
HDDC3-205ENST00000559898 GPR27Q9NS67 375 aa17.99■□□□□ 0.47
HDDC3-205ENST00000559898 CNOT8Q9UFF9 292 aaKnown RBP17.99■□□□□ 0.47
HDDC3-205ENST00000559898 HPCAL4Q9UM19 191 aa17.99■□□□□ 0.47
HDDC3-205ENST00000559898 A0A1W2PQC6 194 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 TRABD2BA6NFA1 517 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 AP1G1O43747 822 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 BUB1BO60566 1050 aaPredicted RBP17.98■□□□□ 0.47
HDDC3-205ENST00000559898 NEBLO76041 1014 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 PRKCGP05129 697 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 TIMP2P16035 220 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 IL1R2P27930 398 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 MIPP30301 263 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 NUDT1P36639 197 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 ETFBP38117 255 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 PBX1P40424 430 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 TPI1P60174 286 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 SNRPD1P62314 119 aaKnown RBP17.98■□□□□ 0.47
HDDC3-205ENST00000559898 FANCCQ00597 558 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 KLHL30Q0D2K2 578 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 FZD2Q14332 565 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 PROX2Q3B8N5 592 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 HGSNATQ68CP4 663 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 TXNRD3NBQ6F5E7 133 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 GDPD4Q6W3E5 623 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 ZSWIM9Q86XI8 627 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 ARHGAP12Q8IWW6 846 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 UMODL1-AS1Q8N2C9 162 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 ZNF653Q96CK0 615 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 FEM1CQ96JP0 617 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 BTBD6Q96KE9 485 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 EPAS1Q99814 870 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 C1QTNF2Q9BXJ5 285 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 PARVAQ9NVD7 372 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 COQ6Q9Y2Z9 468 aa17.98■□□□□ 0.47
HDDC3-205ENST00000559898 DSPP15924 2871 aaKnown RBP17.98■□□□□ 0.47
HDDC3-205ENST00000559898 TTC24A2A3L6 582 aaPredicted RBP17.97■□□□□ 0.47
HDDC3-205ENST00000559898 ANKRD62A6NC57 917 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 AREL1O15033 823 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 CASC3O15234 703 aaKnown RBP17.97■□□□□ 0.47
HDDC3-205ENST00000559898 MMP20O60882 483 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 POP4O95707 220 aaKnown RBP17.97■□□□□ 0.47
HDDC3-205ENST00000559898 SERPINC1P01008 464 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 PAPOLAP51003 745 aaKnown RBP17.97■□□□□ 0.47
HDDC3-205ENST00000559898 RHOAP61586 193 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 RPS21P63220 83 aaKnown RBP17.97■□□□□ 0.47
HDDC3-205ENST00000559898 CYP4F3Q08477 520 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 OVGP1Q12889 678 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 INAVAQ3KP66 663 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 FILIP1LQ4L180 1135 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 KIAA1161Q6NSJ0 714 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 C19orf48Q6RUI8 117 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 CPNE8Q86YQ8 564 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 VCPIP1Q96JH7 1222 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 TCEAL2Q9H3H9 227 aaPredicted RBP17.97■□□□□ 0.47
HDDC3-205ENST00000559898 RETREG1Q9H6L5 497 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 MBNL1Q9NR56 388 aaKnown RBP17.97■□□□□ 0.47
HDDC3-205ENST00000559898 KLHL11Q9NVR0 708 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 ADAMTS20P59510 1910 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 PKD1L2Q7Z442 2459 aa17.97■□□□□ 0.47
HDDC3-205ENST00000559898 NBEAQ8NFP9 2946 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 LY6G6EA0A0G2JKS1 128 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 EEF2KO00418 725 aaKnown RBP17.96■□□□□ 0.47
HDDC3-205ENST00000559898 MUSKO15146 869 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 YKT6O15498 198 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 LRCH4O75427 683 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 RFPL3O75679 317 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 PIAS2O75928 621 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 CCDC172P0C7W6 258 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 ERCC2P18074 760 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 IGFALSP35858 605 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 YBEYP58557 167 aaPredicted RBP17.96■□□□□ 0.47
HDDC3-205ENST00000559898 ERMARDQ5T6L9 678 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 OXR1Q8N573 874 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 CPLX3Q8WVH0 158 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 GDAP1L1Q96MZ0 367 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 WRAP53Q9BUR4 548 aaKnown RBP17.96■□□□□ 0.47
HDDC3-205ENST00000559898 CCDC86Q9H6F5 360 aaKnown RBP17.96■□□□□ 0.47
HDDC3-205ENST00000559898 CATSPERBQ9H7T0 1116 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 ETNK2Q9NVF9 386 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 DNAJC28Q9NX36 388 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 RAXQ9Y2V3 346 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 HS3ST3A1Q9Y663 406 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 U3KQA8 63 aa17.96■□□□□ 0.47
HDDC3-205ENST00000559898 COL27A1Q8IZC6 1860 aaPredicted RBP17.96■□□□□ 0.47
HDDC3-205ENST00000559898 CXorf51AA0A1B0GTR3 108 aa17.95■□□□□ 0.46
HDDC3-205ENST00000559898 A6NNZ2 444 aa17.95■□□□□ 0.46
HDDC3-205ENST00000559898 PRAMEF11O60813 436 aa17.95■□□□□ 0.46
HDDC3-205ENST00000559898 GZMAP12544 262 aa17.95■□□□□ 0.46
HDDC3-205ENST00000559898 GEMIN4P57678 1058 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms