RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 GOLGA6DP0CG33 693 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 XPAP23025 273 aaPredicted RBP10.2□□□□□ -0.78
USP3-216ENST00000559873 PTPN3P26045 913 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 SLC8A1P32418 973 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 PAFAH1B1P43034 410 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 FNTBP49356 437 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 SUOXP51687 545 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 NEK3P51956 506 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 LMNB2Q03252 620 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 ZBTB17Q13105 803 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 SLC14A2Q15849 920 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 P3H1Q32P28 736 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 TEX44Q53QW1 395 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 ZNF805Q5CZA5 627 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 BRAT1Q6PJG6 821 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 GDPD4Q6W3E5 623 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 SYT10Q6XYQ8 523 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 NYAP1Q6ZVC0 841 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 ADAT2Q7Z6V5 191 aaKnown RBP10.2□□□□□ -0.78
USP3-216ENST00000559873 MAML2Q8IZL2 1156 aaPredicted RBP10.2□□□□□ -0.78
USP3-216ENST00000559873 NDUFAF2Q8N183 169 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 CCDC89Q8N998 374 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 CHST14Q8NCH0 376 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 OR6K2Q8NGY2 324 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 SLC35B2Q8TB61 432 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 HCAR2Q8TDS4 363 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 NKD2Q969F2 451 aaPredicted RBP10.2□□□□□ -0.78
USP3-216ENST00000559873 FAM129BQ96TA1 746 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 SEMA3CQ99985 751 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 BTBD1Q9H0C5 482 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 SGK2Q9HBY8 427 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 FBXL12Q9NXK8 326 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 GOLGA6AQ9NYA3 693 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 USP36Q9P275 1121 aaKnown RBP10.2□□□□□ -0.78
USP3-216ENST00000559873 EVLQ9UI08 416 aaPredicted RBP10.2□□□□□ -0.78
USP3-216ENST00000559873 TPX2Q9ULW0 747 aaKnown RBP10.2□□□□□ -0.78
USP3-216ENST00000559873 CYP8B1Q9UNU6 501 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 ZNF148Q9UQR1 794 aa10.2□□□□□ -0.78
USP3-216ENST00000559873 SHROOM3Q8TF72 1996 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 A0A1W2PP55 124 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 LRRC72A6NJI9 287 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 MID1O15344 667 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 MAP3K13O43283 966 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 LIASO43766 372 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 OPHN1O60890 802 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 NDUFS2O75306 463 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 IGLV3-19P01714 112 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 CTSLP07711 333 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 CR2P20023 1033 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 RBL1P28749 1068 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 CD6P30203 668 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 STIP1P31948 543 aaKnown RBP10.19□□□□□ -0.78
USP3-216ENST00000559873 PXNP49023 591 aaPredicted RBP10.19□□□□□ -0.78
USP3-216ENST00000559873 TPMTP51580 245 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 MAXP61244 160 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 POLR2LP62875 67 aaKnown RBP10.19□□□□□ -0.78
USP3-216ENST00000559873 PRPSAP1Q14558 356 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 ELF2Q15723 593 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 CCNG2Q16589 344 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 ARSIQ5FYB1 569 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 ERAP2Q6P179 960 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 FBXL19Q6PCT2 694 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 DRICH1Q6PGQ1 229 aaPredicted RBP10.19□□□□□ -0.78
USP3-216ENST00000559873 ARHGEF18Q6ZSZ5 1173 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 ERN2Q76MJ5 926 aaKnown RBP10.19□□□□□ -0.78
USP3-216ENST00000559873 CEP68Q76N32 757 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 HDDC3Q8N4P3 179 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 ZBTB44Q8NCP5 570 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 GAB3Q8WWW8 586 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 ATG4AQ8WYN0 398 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 NELL1Q92832 810 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 RAB7BQ96AH8 199 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 TEKT5Q96M29 485 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 SPATA13Q96N96 652 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 AGAP3Q96P47 875 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 FAM118BQ9BPY3 351 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 HDAC8Q9BY41 377 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 PCED1AQ9H1Q7 454 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 SLC25A51Q9H1U9 297 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 SLC6A17Q9H1V8 727 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 ITM2CQ9NQX7 267 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 VPS45Q9NRW7 570 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 DKK3Q9UBP4 350 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 RSPH14Q9UHP6 348 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 DNPEPQ9ULA0 475 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 ATP8A1Q9Y2Q0 1164 aa10.19□□□□□ -0.78
USP3-216ENST00000559873 TCRBV7S2A1N4TA0A589 114 aa10.18□□□□□ -0.78
USP3-216ENST00000559873 TSPAN11A1L157 253 aa10.18□□□□□ -0.78
USP3-216ENST00000559873 MUSKO15146 869 aa10.18□□□□□ -0.78
USP3-216ENST00000559873 ANXA9O76027 345 aa10.18□□□□□ -0.78
USP3-216ENST00000559873 PIGNO95427 931 aa10.18□□□□□ -0.78
USP3-216ENST00000559873 CPP00450 1065 aa10.18□□□□□ -0.78
USP3-216ENST00000559873 ITGAVP06756 1048 aa10.18□□□□□ -0.78
USP3-216ENST00000559873 ADRB3P13945 408 aa10.18□□□□□ -0.78
USP3-216ENST00000559873 P2RY2P41231 377 aa10.18□□□□□ -0.78
USP3-216ENST00000559873 DPP6P42658 865 aa10.18□□□□□ -0.78
USP3-216ENST00000559873 RGRP47804 291 aa10.18□□□□□ -0.78
USP3-216ENST00000559873 CKAP4Q07065 602 aaKnown RBP10.18□□□□□ -0.78
USP3-216ENST00000559873 ELP6Q0PNE2 266 aa10.18□□□□□ -0.78
USP3-216ENST00000559873 WASHC5Q12768 1159 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms