RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 KIF5AQ12840 1032 aa18.95■□□□□ 0.62
CASC4-209ENST00000559222 TRIM61Q5EBN2 209 aa18.95■□□□□ 0.62
CASC4-209ENST00000559222 KAZNQ674X7 775 aa18.95■□□□□ 0.62
CASC4-209ENST00000559222 GDPD4Q6W3E5 623 aa18.95■□□□□ 0.62
CASC4-209ENST00000559222 NT5DC3Q86UY8 548 aa18.95■□□□□ 0.62
CASC4-209ENST00000559222 OR2I1PQ8NGU4 316 aa18.95■□□□□ 0.62
CASC4-209ENST00000559222 ALG3Q92685 438 aa18.95■□□□□ 0.62
CASC4-209ENST00000559222 KLK6Q92876 244 aa18.95■□□□□ 0.62
CASC4-209ENST00000559222 SAE1Q9UBE0 346 aaPredicted RBP18.95■□□□□ 0.62
CASC4-209ENST00000559222 HEY1Q9Y5J3 304 aa18.95■□□□□ 0.62
CASC4-209ENST00000559222 DMXL1Q9Y485 3027 aa18.95■□□□□ 0.62
CASC4-209ENST00000559222 LAMA1P25391 3075 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 hCG_1818297A0A087WSY0 165 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 TBC1D3DA0A087WVF3 549 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 TBC1D3IA0A087WXS9 549 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 TBC1D3EA0A087X179 549 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 TBC1D3KA0A087X1G2 549 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 LNP1A1A4G5 178 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 TBC1D3FA6NER0 549 aaPredicted RBP18.94■□□□□ 0.62
CASC4-209ENST00000559222 LRRC72A6NJI9 287 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 C16orf96A6NNT2 1141 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 TBC1D3LB9A6J9 549 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 SLC7A4O43246 635 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 PRKCGP05129 697 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 CFIP05156 583 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 TBC1D3HP0C7X1 549 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 ADRB3P13945 408 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 NEK3P51956 506 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 BNC1Q01954 994 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 ZNF805Q5CZA5 627 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 TBC1D3GQ6DHY5 549 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 TBC1D3CQ6IPX1 549 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 SRLQ86TD4 932 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 VSIG1Q86XK7 387 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 CAMK1DQ8IU85 385 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 TBC1D3Q8IZP1 549 aaPredicted RBP18.94■□□□□ 0.62
CASC4-209ENST00000559222 CCDC112Q8NEF3 446 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 SLC6A18Q96N87 628 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 ZNF599Q96NL3 588 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 PSKH2Q96QS6 385 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 LGMNQ99538 433 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 HDAC8Q9BY41 377 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 PCED1AQ9H1Q7 454 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 DYRK4Q9NR20 520 aa18.94■□□□□ 0.62
CASC4-209ENST00000559222 ZFR2Q9UPR6 939 aaKnown RBP18.94■□□□□ 0.62
CASC4-209ENST00000559222 PTPRZ1P23471 2315 aaPredicted RBP18.94■□□□□ 0.62
CASC4-209ENST00000559222 RNGTTO60942 597 aaKnown RBP18.93■□□□□ 0.62
CASC4-209ENST00000559222 CR2P20023 1033 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 CTNNA2P26232 953 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 PEX5P50542 639 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 ZNF235Q14590 738 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 IHHQ14623 411 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 RFTN1Q14699 578 aaPredicted RBP18.93■□□□□ 0.62
CASC4-209ENST00000559222 WDR45BQ5MNZ6 344 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 SYCP2LQ5T4T6 812 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 SEL1L3Q68CR1 1132 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 KIAA1524Q8TCG1 905 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.93■□□□□ 0.62
CASC4-209ENST00000559222 MAML1Q92585 1016 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 HAUS1Q96CS2 278 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 PPP1R16AQ96I34 528 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 OLFM3Q96PB7 478 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 CAPN10Q9HC96 672 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 NT5MQ9NPB1 228 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 SEPT3Q9UH03 358 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 GUCA1BQ9UMX6 200 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 CA5BQ9Y2D0 317 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 PCDHA3Q9Y5H8 950 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 FADS3Q9Y5Q0 445 aa18.93■□□□□ 0.62
CASC4-209ENST00000559222 TRPM6Q9BX84 2022 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 DDX3YO15523 660 aaKnown RBP18.92■□□□□ 0.62
CASC4-209ENST00000559222 CST8O60676 142 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 TIMP2P16035 220 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 MMP13P45452 471 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 SCNN1BP51168 640 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 CCR5P51681 352 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 SEMG2Q02383 582 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 SFSWAPQ12872 951 aaKnown RBP18.92■□□□□ 0.62
CASC4-209ENST00000559222 ZBTB17Q13105 803 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 IFI16Q16666 785 aaKnown RBP18.92■□□□□ 0.62
CASC4-209ENST00000559222 AASDHQ4L235 1098 aaPredicted RBP18.92■□□□□ 0.62
CASC4-209ENST00000559222 SLC23A3Q6PIS1 610 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 CCDC50Q8IVM0 306 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.92■□□□□ 0.62
CASC4-209ENST00000559222 TEX26Q8N6G2 289 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 C12orf50Q8NA57 414 aaPredicted RBP18.92■□□□□ 0.62
CASC4-209ENST00000559222 EXD1Q8NHP7 514 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 HDAC11Q96DB2 347 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 ZNF830Q96NB3 372 aaPredicted RBP18.92■□□□□ 0.62
CASC4-209ENST00000559222 TSGA13Q96PP4 275 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 MYOCQ99972 504 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 MGME1Q9BQP7 344 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 HEMGNQ9BXL5 484 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 CEP41Q9BYV8 373 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 CPEB1Q9BZB8 566 aaKnown RBP18.92■□□□□ 0.62
CASC4-209ENST00000559222 KCNF1Q9H3M0 494 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 TM9SF3Q9HD45 589 aa18.92■□□□□ 0.62
CASC4-209ENST00000559222 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.91■□□□□ 0.62
CASC4-209ENST00000559222 A0A1W2PPC4 97 aa18.91■□□□□ 0.62
CASC4-209ENST00000559222 A0A1W2PQU0 124 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms