RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 CARNMT1Q8N4J0 409 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 ZCCHC9Q8N567 271 aaKnown RBP7.6□□□□□ -1.19
SPG11-213ENST00000558988 MINDY1Q8N5J2 469 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 UBR7Q8N806 425 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 SPATA20Q8TB22 786 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 GANCQ8TET4 914 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 SIPA1Q96FS4 1042 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 FAXDC2Q96IV6 333 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 PIWIL1Q96J94 861 aaKnown RBP7.6□□□□□ -1.19
SPG11-213ENST00000558988 UBXN6Q9BZV1 441 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 MKRN2Q9H000 416 aaKnown RBP7.6□□□□□ -1.19
SPG11-213ENST00000558988 MTG2Q9H4K7 406 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 SLC32A1Q9H598 525 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 UBE2TQ9NPD8 197 aaPredicted RBP7.6□□□□□ -1.19
SPG11-213ENST00000558988 ACP6Q9NPH0 428 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 ABCC13Q9NSE7 274 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 THAP10Q9P2Z0 257 aaPredicted RBP7.6□□□□□ -1.19
SPG11-213ENST00000558988 EVLQ9UI08 416 aaPredicted RBP7.6□□□□□ -1.19
SPG11-213ENST00000558988 GGA2Q9UJY4 613 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 KIAA1257Q9ULG3 409 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 PLA2G4CQ9UP65 541 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 SLC27A6Q9Y2P4 619 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 HBS1LQ9Y450 684 aaKnown RBP7.6□□□□□ -1.19
SPG11-213ENST00000558988 CEP83Q9Y592 693 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 ASCC3Q8N3C0 2202 aaKnown RBP7.59□□□□□ -1.19
SPG11-213ENST00000558988 PLXND1Q9Y4D7 1925 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 TYW5A2RUC4 315 aaKnown RBP7.59□□□□□ -1.19
SPG11-213ENST00000558988 FAM47DPA6NHR8 397 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 KCNJ18B7U540 433 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 PES1O00541 588 aaKnown RBP7.59□□□□□ -1.19
SPG11-213ENST00000558988 OPHN1O60890 802 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 SERPINF2P08697 491 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 PABPC1P11940 636 aaKnown RBP7.59□□□□□ -1.19
SPG11-213ENST00000558988 GNSP15586 552 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 HLA-FP30511 346 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 SLC6A4P31645 630 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 CD70P32970 193 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 DPP6P42658 865 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 MTIF2P46199 727 aaKnown RBP7.59□□□□□ -1.19
SPG11-213ENST00000558988 TPMTP51580 245 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 RPS24P62847 133 aaKnown RBP7.59□□□□□ -1.19
SPG11-213ENST00000558988 SIM1P81133 766 aaPredicted RBP7.59□□□□□ -1.19
SPG11-213ENST00000558988 EIF4HQ15056 248 aaKnown RBP7.59□□□□□ -1.19
SPG11-213ENST00000558988 CNGA2Q16280 664 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 TPD52L1Q16890 204 aaPredicted RBP7.59□□□□□ -1.19
SPG11-213ENST00000558988 HSP90AA4PQ58FG1 418 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 WDR45BQ5MNZ6 344 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 DCAF12L1Q5VU92 463 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 MBLAC2Q68D91 279 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 PASD1Q8IV76 773 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 MFN1Q8IWA4 741 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 CCDC117Q8IWD4 279 aaPredicted RBP7.59□□□□□ -1.19
SPG11-213ENST00000558988 TRIM59Q8IWR1 403 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 CFAP52Q8N1V2 620 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 ZNF276Q8N554 614 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 LMO3Q8TAP4 145 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 CEP76Q8TAP6 659 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 WFDC5Q8TCV5 224 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 SLC35F5Q8WV83 523 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 KCTD13Q8WZ19 329 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 CAMK1GQ96NX5 476 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 FAM124BQ9H5Z6 455 aaPredicted RBP7.59□□□□□ -1.19
SPG11-213ENST00000558988 CD248Q9HCU0 757 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 EIF2B4Q9UI10 523 aaKnown RBP7.59□□□□□ -1.19
SPG11-213ENST00000558988 FBXO10Q9UK96 956 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 NAALADL1Q9UQQ1 740 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 CORINQ9Y5Q5 1042 aa7.59□□□□□ -1.19
SPG11-213ENST00000558988 CACNA1BQ00975 2339 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 MED7O43513 233 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 ACSL4O60488 711 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 GRAP2O75791 330 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 FBXO21O94952 628 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 FSBPO95073 299 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 FGFR1OPO95684 399 aaKnown RBP7.58□□□□□ -1.2
SPG11-213ENST00000558988 GNA14O95837 355 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 APOEP02649 317 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 CEACAM1P13688 526 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 POLR2EP19388 210 aaKnown RBP7.58□□□□□ -1.2
SPG11-213ENST00000558988 CSRP1P21291 193 aaKnown RBP7.58□□□□□ -1.2
SPG11-213ENST00000558988 GNA15P30679 374 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 CDH18Q13634 790 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 STILQ15468 1287 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 CCDC157Q569K6 752 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 FAM133BQ5BKY9 247 aaKnown RBP7.58□□□□□ -1.2
SPG11-213ENST00000558988 SPDYCQ5MJ68 293 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 PIK3R6Q5UE93 754 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 SYPL2Q5VXT5 272 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 NUGGCQ68CJ6 796 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 NADSYN1Q6IA69 706 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 MSANTD2Q6P1R3 559 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 LAYNQ6UX15 382 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 MMS22LQ6ZRQ5 1243 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 RABEPKQ7Z6M1 372 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 TAC4Q86UU9 113 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 ADIPOR2Q86V24 386 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 CHSY1Q86X52 802 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 CIR1Q86X95 450 aaPredicted RBP7.58□□□□□ -1.2
SPG11-213ENST00000558988 UNC45BQ8IWX7 931 aa7.58□□□□□ -1.2
SPG11-213ENST00000558988 DHX40Q8IX18 779 aaKnown RBP7.58□□□□□ -1.2
SPG11-213ENST00000558988 FAM217AQ8IXS0 508 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms