RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 HDDC3Q8N4P3 179 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 COG1Q8WTW3 980 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 HTR3CQ8WXA8 447 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 ARRDC3Q96B67 414 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 MS4A14Q96JA4 679 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 NSMCE3Q96MG7 304 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 NUDCD1Q96RS6 583 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 ITM2CQ9NQX7 267 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 FBXL12Q9NXK8 326 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 AMACRQ9UHK6 382 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 IGHV1OR15-9A0A0B4J2B8 117 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 CTAGE9A4FU28 777 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 RPP40O75818 363 aaKnown RBP17.66■□□□□ 0.42
TPM1-214ENST00000558544 DRD3P35462 400 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 AP1S1P61966 158 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 DSC2Q02487 901 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 WASHC5Q12768 1159 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 SIX1Q15475 284 aaPredicted RBP17.66■□□□□ 0.42
TPM1-214ENST00000558544 GDPD4Q6W3E5 623 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 RASGEF1CQ8N431 466 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 CNTD1Q8N815 330 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 C1orf54Q8WWF1 131 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 GAB3Q8WWW8 586 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 PPP1R16AQ96I34 528 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 LRIG1Q96JA1 1093 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 KLHL32Q96NJ5 620 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 AGAP3Q96P47 875 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 OMDQ99983 421 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 SEMA3CQ99985 751 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 OSBPL1AQ9BXW6 950 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 CPEB1Q9BZB8 566 aaKnown RBP17.66■□□□□ 0.42
TPM1-214ENST00000558544 DYRK4Q9NR20 520 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 HAUS2Q9NVX0 235 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 SMARCAL1Q9NZC9 954 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 DNPEPQ9ULA0 475 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 NCKAP1Q9Y2A7 1128 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 ATP8A1Q9Y2Q0 1164 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 ZNF185O15231 689 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 KCNN4O15554 427 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 MTSS1O43312 755 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 HRO43593 1189 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 LILRB5O75023 590 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 BCKDHBP21953 392 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 MAPK8P45983 427 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 CNTN1Q12860 1018 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 BYSLQ13895 437 aaKnown RBP17.65■□□□□ 0.42
TPM1-214ENST00000558544 GRM3Q14832 879 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 TEX44Q53QW1 395 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 PAPD7Q5XG87 772 aaKnown RBP17.65■□□□□ 0.42
TPM1-214ENST00000558544 ALG1LQ6GMV1 187 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 NCEH1Q6PIU2 408 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 ZC3H14Q6PJT7 736 aaKnown RBP17.65■□□□□ 0.42
TPM1-214ENST00000558544 USP30Q70CQ3 517 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 KBTBD6Q86V97 674 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 CAMK1DQ8IU85 385 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 SLC35B2Q8TB61 432 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 MAIP1Q8WWC4 291 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 ATOH1Q92858 354 aaPredicted RBP17.65■□□□□ 0.42
TPM1-214ENST00000558544 C16orf45Q96MC5 204 aaPredicted RBP17.65■□□□□ 0.42
TPM1-214ENST00000558544 NEUROG2Q9H2A3 272 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 ATP13A3Q9H7F0 1226 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 NOD2Q9HC29 1040 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 FAM86C1Q9NVL1 165 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 RAPGEFL1Q9UHV5 662 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 MBD1Q9UIS9 605 aaPredicted RBP17.65■□□□□ 0.42
TPM1-214ENST00000558544 DOCK9Q9BZ29 2069 aa17.65■□□□□ 0.42
TPM1-214ENST00000558544 LRRK1Q38SD2 2015 aa17.64■□□□□ 0.42
TPM1-214ENST00000558544 BCLAF3A2AJT9 711 aaKnown RBP17.64■□□□□ 0.41
TPM1-214ENST00000558544 LIASO43766 372 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 IGLV3-19P01714 112 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 TCP1P17987 556 aaKnown RBP17.64■□□□□ 0.41
TPM1-214ENST00000558544 ITGB7P26010 798 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 SERPINA4P29622 427 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 CD6P30203 668 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 ETF1P62495 437 aaKnown RBP17.64■□□□□ 0.41
TPM1-214ENST00000558544 BCL2L1Q07817 233 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 NIPAL4Q0D2K0 466 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 SFSWAPQ12872 951 aaKnown RBP17.64■□□□□ 0.41
TPM1-214ENST00000558544 SNX1Q13596 522 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 ZNF805Q5CZA5 627 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.64■□□□□ 0.41
TPM1-214ENST00000558544 SYT10Q6XYQ8 523 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 NYAP1Q6ZVC0 841 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 PARS2Q7L3T8 475 aaKnown RBP17.64■□□□□ 0.41
TPM1-214ENST00000558544 ZNF567Q8N184 647 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 TOE1Q96GM8 510 aaKnown RBP17.64■□□□□ 0.41
TPM1-214ENST00000558544 TEKT5Q96M29 485 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 TUBGCP5Q96RT8 1024 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 FERMT1Q9BQL6 677 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 FRMD8P1Q9BZ68 369 aaPredicted RBP17.64■□□□□ 0.41
TPM1-214ENST00000558544 KLHL8Q9P2G9 620 aaPredicted RBP17.64■□□□□ 0.41
TPM1-214ENST00000558544 FZD4Q9ULV1 537 aa17.64■□□□□ 0.41
TPM1-214ENST00000558544 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.63■□□□□ 0.41
TPM1-214ENST00000558544 C16orf96A6NNT2 1141 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 PGRMC1O00264 195 aaKnown RBP17.63■□□□□ 0.41
TPM1-214ENST00000558544 CES2O00748 559 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 OXTRP30559 389 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 ACSL1P33121 698 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 CNR2P34972 360 aa17.63■□□□□ 0.41
TPM1-214ENST00000558544 RALGPS1Q5JS13 557 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms