RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CD6P30203 668 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 CCR1P32246 355 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 CSKP41240 450 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 TPMTP51580 245 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 SLC25A11Q02978 314 aaKnown RBP10.5□□□□□ -0.73
TPM1-212ENST00000558347 CDH18Q13634 790 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 E2F5Q15329 346 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 HADHQ16836 314 aaKnown RBP10.5□□□□□ -0.73
TPM1-212ENST00000558347 SLC25A52Q3SY17 297 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 SLC23A3Q6PIS1 610 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 RELL1Q8IUW5 271 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 ATP6V0D2Q8N8Y2 350 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 ZNF557Q8N988 423 aaPredicted RBP10.5□□□□□ -0.73
TPM1-212ENST00000558347 OR2T3Q8NH03 318 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 ATL2Q8NHH9 583 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 PRCCQ92733 491 aaPredicted RBP10.5□□□□□ -0.73
TPM1-212ENST00000558347 TTC17Q96AE7 1141 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 PGAP3Q96FM1 320 aaPredicted RBP10.5□□□□□ -0.73
TPM1-212ENST00000558347 TOE1Q96GM8 510 aaKnown RBP10.5□□□□□ -0.73
TPM1-212ENST00000558347 ZNF419Q96HQ0 510 aaPredicted RBP10.5□□□□□ -0.73
TPM1-212ENST00000558347 MRGPRX3Q96LB0 322 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 CFAP57Q96MR6 1250 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 PRMT1Q99873 361 aaKnown RBP10.5□□□□□ -0.73
TPM1-212ENST00000558347 MTG2Q9H4K7 406 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 PRSS16Q9NQE7 514 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 DDX56Q9NY93 547 aaKnown RBP10.5□□□□□ -0.73
TPM1-212ENST00000558347 EVLQ9UI08 416 aaPredicted RBP10.5□□□□□ -0.73
TPM1-212ENST00000558347 STAP1Q9ULZ2 295 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 PI4KAP42356 2102 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 TCRBV7S2A1N4TA0A589 114 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 F5H5T6 163 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 H0Y626 953 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 NDUFS2O75306 463 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 IGLV3-19P01714 112 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 GSTA1P08263 222 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 KRT7P08729 469 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 CHN1P15882 459 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 KCNA4P22459 653 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 MIPP30301 263 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 HNRNPH1P31943 449 aaKnown RBP10.49□□□□□ -0.73
TPM1-212ENST00000558347 CETN2P41208 172 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 CTSOP43234 321 aaPredicted RBP10.49□□□□□ -0.73
TPM1-212ENST00000558347 NUMBP49757 651 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 NME3Q13232 169 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 AUHQ13825 339 aaKnown RBP10.49□□□□□ -0.73
TPM1-212ENST00000558347 QPCTQ16769 361 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 C15orf59Q2T9L4 293 aaPredicted RBP10.49□□□□□ -0.73
TPM1-212ENST00000558347 ANKRD20A8PQ5CZ79 823 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 PITRM1Q5JRX3 1037 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 SWT1Q5T5J6 900 aaKnown RBP10.49□□□□□ -0.73
TPM1-212ENST00000558347 PIGWQ7Z7B1 504 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 ANKS4BQ8N8V4 417 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 CCDC197Q8NCU1 140 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 EXD1Q8NHP7 514 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 CCHCR1Q8TD31 782 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 FAM172AQ8WUF8 416 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 TEKT4Q8WW24 435 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 RNF34Q969K3 372 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 IGSF8Q969P0 613 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 TBCBQ99426 244 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 SELENOSQ9BQE4 189 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 GPR174Q9BXC1 333 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 INTS9Q9NV88 658 aaKnown RBP10.49□□□□□ -0.73
TPM1-212ENST00000558347 HS3ST4Q9Y661 456 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 PCDH15Q96QU1 1955 aa10.49□□□□□ -0.73
TPM1-212ENST00000558347 NYNRINQ9P2P1 1898 aaKnown RBP10.49□□□□□ -0.73
TPM1-212ENST00000558347 I6L893 689 aaPredicted RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 M0QYT0 321 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 DNAJC8O75937 253 aaPredicted RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 F9P00740 461 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 CFIP05156 583 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 C7P10643 843 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 SLC2A3P11169 496 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 ACADMP11310 421 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 TCF4P15884 667 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 ENGP17813 658 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 MAOBP27338 520 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 HOXD12P35452 270 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 DPP6P42658 865 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 SSR1P43307 286 aaKnown RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 HDAC4P56524 1084 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 COPS2P61201 443 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 ATP11AP98196 1134 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 KLF1Q13351 362 aaPredicted RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 CCNG2Q16589 344 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 DUOXA1Q1HG43 343 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 PLEKHG6Q3KR16 790 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 BOLA3Q53S33 107 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 SH3PXD2AQ5TCZ1 1133 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 DAB2IPQ5VWQ8 1189 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 FBXL22Q6P050 247 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 CYP4V2Q6ZWL3 525 aaPredicted RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 C14orf80Q86SX3 495 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 FAM124AQ86V42 546 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 CCDC50Q8IVM0 306 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 CCDC117Q8IWD4 279 aaPredicted RBP10.48□□□□□ -0.73
TPM1-212ENST00000558347 CCDC13Q8IYE1 715 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 RCOR2Q8IZ40 523 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 RGL4Q8IZJ4 473 aa10.48□□□□□ -0.73
TPM1-212ENST00000558347 APCDD1Q8J025 514 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms