RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 IGFBP4P22692 258 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 S100A1P23297 94 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 CDH5P33151 784 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 TTKP33981 857 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 RCVRNP35243 200 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 BACE1P56817 501 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 CNTN2Q02246 1040 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 MERTKQ12866 999 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 NFATC3Q12968 1075 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 STX5Q13190 355 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 OLIG2Q13516 323 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 FASTKQ14296 549 aaKnown RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 CCDC14Q49A88 953 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 ZNF667Q5HYK9 610 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 NHSL2Q5HYW2 709 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 GRTP1Q5TC63 336 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 FSTL4Q6MZW2 842 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 PRRT2Q7Z6L0 340 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 IGFN1Q86VF2 1251 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 WDR49Q8IV35 697 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 CNTD1Q8N815 330 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 ZNF420Q8TAQ5 688 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 SYTL5Q8TDW5 730 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 TFAP2CQ92754 450 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 PIWIL1Q96J94 861 aaKnown RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 CPNE1Q99829 537 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 HERC2P3Q9BVR0 1158 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 SOX17Q9H6I2 414 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 SPAG4Q9NPE6 437 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 FAM49BQ9NUQ9 324 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 DUS2Q9NX74 493 aaKnown RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 SUCOQ9UBS9 1254 aaKnown RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 MID2Q9UJV3 735 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 FEM1BQ9UK73 627 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 CDH7Q9ULB5 785 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 AP4E1Q9UPM8 1137 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 TMA7Q9Y2S6 64 aaKnown RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 GIT1Q9Y2X7 761 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 PCDHGA7Q9Y5G6 932 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 MYO18AQ92614 2054 aaKnown RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 SOBPA7XYQ1 873 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 A8MU76 341 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 MRASO14807 208 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 PAPSS1O43252 624 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 GRID2O43424 1007 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 SNAP91O60641 907 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 ICAM1P05362 532 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 C8BP07358 591 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 IL10P22301 178 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 SDC4P31431 198 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 MAGEA3P43357 314 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 SLC7A2P52569 658 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 RAD23AP54725 363 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 MCCD1P59942 119 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 ENPEPQ07075 957 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 MAPK11Q15759 364 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 CARTPTQ16568 116 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 KIZQ2M2Z5 673 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 PGS1Q32NB8 556 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 BOLA3Q53S33 107 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 PRAMEF19Q5SWL8 479 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 LIPMQ5VYY2 423 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 REP15Q6BDI9 236 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 ABRAXAS1Q6UWZ7 409 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 C4orf22Q6V702 233 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 DNAJC14Q6Y2X3 702 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 FAM183BPQ6ZVS7 135 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 UTS2BQ765I0 119 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 CDR2LQ86X02 465 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 SNX29P2Q8IUI4 249 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 CCDC60Q8IWA6 550 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 SPATA6LQ8N4H0 392 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 GABPB2Q8TAK5 448 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 MAGEE2Q8TD90 523 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 TRUB1Q8WWH5 349 aaKnown RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 ACDQ96AP0 544 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 SLCO4A1Q96BD0 722 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 RTP4Q96DX8 246 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 NRBF2Q96F24 287 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 ZNF668Q96K58 619 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 LGMNQ99538 433 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 CFHR5Q9BXR6 569 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 IDI2Q9BXS1 227 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 ADNPQ9H2P0 1102 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 MRPL46Q9H2W6 279 aaKnown RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 RPAP3Q9H6T3 665 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 FANCEQ9HB96 536 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 NCKIPSDQ9NZQ3 722 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 GMPR2Q9P2T1 348 aaKnown RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 HMGXB4Q9UGU5 601 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 EGFL7Q9UHF1 273 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 IPO11Q9UI26 975 aaKnown RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 V9GYQ6 96 aa5.12□□□□□ -1.59
HMG20A-204ENST00000558288 GREB1LQ9C091 1923 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-204ENST00000558288 PFDN6O15212 129 aa5.11□□□□□ -1.59
HMG20A-204ENST00000558288 AQP9O43315 295 aa5.11□□□□□ -1.59
HMG20A-204ENST00000558288 GCATO75600 419 aa5.11□□□□□ -1.59
HMG20A-204ENST00000558288 PABPC1P11940 636 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms