RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 SLC1A5Q15758 541 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 PLEKHG6Q3KR16 790 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 ANKRD20A4Q4UJ75 823 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 SIRPB2Q5JXA9 342 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 CHRDL2Q6WN34 429 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 CELF5Q8N6W0 485 aaKnown RBP20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 RPL10LQ96L21 214 aaKnown RBP20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 ZMYM5Q9UJ78 669 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 SOX13Q9UN79 622 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 C2orf16Q68DN1 1984 aa20.65■□□□□ 0.9
SNRPA1-205ENST00000558036 PAPLNO95428 1278 aa20.64■□□□□ 0.89
SNRPA1-205ENST00000558036 SERPINF2P08697 491 aa20.64■□□□□ 0.89
SNRPA1-205ENST00000558036 CR2P20023 1033 aa20.64■□□□□ 0.89
SNRPA1-205ENST00000558036 CTSOP43234 321 aaPredicted RBP20.64■□□□□ 0.89
SNRPA1-205ENST00000558036 GUCY1A3Q02108 690 aa20.64■□□□□ 0.89
SNRPA1-205ENST00000558036 SEPT6Q14141 434 aa20.64■□□□□ 0.89
SNRPA1-205ENST00000558036 ATXN7L2Q5T6C5 722 aaPredicted RBP20.64■□□□□ 0.89
SNRPA1-205ENST00000558036 MICALCLQ6ZW33 695 aa20.64■□□□□ 0.89
SNRPA1-205ENST00000558036 GPR149Q86SP6 731 aa20.64■□□□□ 0.89
SNRPA1-205ENST00000558036 ZFYVE19Q96K21 471 aa20.64■□□□□ 0.89
SNRPA1-205ENST00000558036 LMLNQ96KR4 655 aa20.64■□□□□ 0.89
SNRPA1-205ENST00000558036 SCUBE2Q9NQ36 999 aa20.64■□□□□ 0.89
SNRPA1-205ENST00000558036 TBC1D14Q9P2M4 693 aa20.64■□□□□ 0.89
SNRPA1-205ENST00000558036 FAM237BA0A1B0GVD1 139 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 GOLGA8TH3BQL2 631 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 AP3B1O00203 1094 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 INSIG1O15503 277 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 USP1O94782 785 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 PRKCGP05129 697 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 ATXN1LP0C7T5 689 aaKnown RBP20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 ATP5DP30049 168 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 SPANXN3Q5MJ09 141 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 TRABD2AQ86V40 505 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 SLC26A11Q86WA9 606 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 ASIC4Q96FT7 647 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 IFT43Q96FT9 208 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 ASB16Q96NS5 453 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 TM6SF2Q9BZW4 377 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 PPCSQ9HAB8 311 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 LHX3Q9UBR4 397 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 SLC2A6Q9UGQ3 507 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 LOC285095A0A1B0GVY8 99 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 STK19P49842 368 aaPredicted RBP20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 RHOAP61586 193 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 CDK18Q07002 472 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 FUT11Q495W5 492 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 PCID2Q5JVF3 399 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 EFHBQ8N7U6 833 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 OR6K2Q8NGY2 324 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 MYLIPQ8WY64 445 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 TTC17Q96AE7 1141 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 CERS2Q96G23 380 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 PKNOX2Q96KN3 472 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 KIFC1Q9BW19 673 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 ZNF576Q9H609 170 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 ARNT2Q9HBZ2 717 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 CHKBQ9Y259 395 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 PCDHGC4Q9Y5F7 938 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 PSAT1Q9Y617 370 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 MYOFQ9NZM1 2061 aa20.63■□□□□ 0.89
SNRPA1-205ENST00000558036 MAGEB16A2A368 324 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 WEE1P30291 646 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 SERPINH1P50454 418 aaKnown RBP20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 RASA2Q15283 850 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 INO80DQ53TQ3 878 aaPredicted RBP20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 PITRM1Q5JRX3 1037 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 RETSATQ6NUM9 610 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 ANKRD54Q6NXT1 300 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 PKN3Q6P5Z2 889 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 TAOK1Q7L7X3 1001 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 C4orf33Q8N1A6 199 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 DUS2Q9NX74 493 aaKnown RBP20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 FAM169AQ9Y6X4 670 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 PIRTP0C851 137 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 BRAFP15056 766 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 TCF3P15923 654 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 DLX2Q07687 328 aaPredicted RBP20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 HSP90AA5PQ58FG0 334 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 EMC10Q5UCC4 262 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 EP400NLQ6ZTU2 488 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 RASSF3Q86WH2 238 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 PPHLN1Q8NEY8 458 aaKnown RBP20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 MZB1Q8WU39 189 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 SMARCD2Q92925 531 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 AGAP2Q99490 1192 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 KLF6Q99612 283 aaPredicted RBP20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 HAUS2Q9NVX0 235 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 TCAF1Q9Y4C2 921 aa20.62■□□□□ 0.89
SNRPA1-205ENST00000558036 MSLNQ13421 630 aaPredicted RBP20.61■□□□□ 0.89
SNRPA1-205ENST00000558036 BMPR2Q13873 1038 aa20.61■□□□□ 0.89
SNRPA1-205ENST00000558036 MPP2Q14168 576 aa20.61■□□□□ 0.89
SNRPA1-205ENST00000558036 ESRP1Q6NXG1 681 aaKnown RBP20.61■□□□□ 0.89
SNRPA1-205ENST00000558036 TMEM184AQ6ZMB5 413 aa20.61■□□□□ 0.89
SNRPA1-205ENST00000558036 CYS1Q717R9 158 aa20.61■□□□□ 0.89
SNRPA1-205ENST00000558036 ACDQ96AP0 544 aa20.61■□□□□ 0.89
SNRPA1-205ENST00000558036 FEM1CQ96JP0 617 aa20.61■□□□□ 0.89
SNRPA1-205ENST00000558036 SMIM14Q96QK8 99 aa20.61■□□□□ 0.89
SNRPA1-205ENST00000558036 NUDCD1Q96RS6 583 aa20.61■□□□□ 0.89
SNRPA1-205ENST00000558036 TNKS2Q9H2K2 1166 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms