RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 DENND6BQ8NEG7 585 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 FGF11Q92914 225 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 GDAP1L1Q96MZ0 367 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 EPAS1Q99814 870 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 CATSPERBQ9H7T0 1116 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 NDFIP2Q9NV92 336 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 LIMA1Q9UHB6 759 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 SIK3Q9Y2K2 1263 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 LGALS16A8MUM7 142 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 RNF103O00237 685 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 TOR1BO14657 336 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 OPA1O60313 960 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 CD160O95971 181 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 IGSF6O95976 241 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 UGT2B4P06133 528 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 NME1P15531 152 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 XPAP23025 273 aaPredicted RBP13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 EIF2S3P41091 472 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 CLDN6P56747 220 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 PTP4A2Q12974 167 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 PDE1CQ14123 709 aaPredicted RBP13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 FZD2Q14332 565 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 GRM3Q14832 879 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 ACAP1Q15027 740 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 PARP15Q460N3 678 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 ZNF542PQ5EBM4 170 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 ZCCHC8Q6NZY4 707 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 DNAJC24Q6P3W2 148 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 DCUN1D2Q6PH85 259 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 LSMEM2Q8N112 164 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 SLC22A18ASQ8N1D0 253 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 CCDC185Q8N715 623 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 RTL3Q8N8U3 475 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 OR6K2Q8NGY2 324 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 GLMNQ92990 594 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 APOLD1Q96LR9 279 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 KLHL32Q96NJ5 620 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 DEPDC7Q96QD5 511 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 PCDHB18PQ96TA0 734 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 AGPAT1Q99943 283 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 CNPY3Q9BT09 278 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 TTYH3Q9C0H2 523 aa13.81□□□□□ -0.2
SNRPA1-204ENST00000558020 K7ESM1 405 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 EPHB6O15197 1021 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 FGF10O15520 208 aaPredicted RBP13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 CREB3O43889 395 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 HOXB3P14651 431 aaPredicted RBP13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 FERP16591 822 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 JUNDP17535 347 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 HTR7P34969 479 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 RPIAP49247 311 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 RHOAP61586 193 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 YPEL5P62699 121 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 FGL2Q14314 439 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 STX1AQ16623 288 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 RAB6CQ53S08 254 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 KDM7AQ6ZMT4 941 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 LEKR1Q6ZMV7 388 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 RBM43Q6ZSC3 357 aaKnown RBP13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 TPCN2Q8NHX9 752 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 HCAR2Q8TDS4 363 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 GRAMD1AQ96CP6 724 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 ERGIC2Q96RQ1 377 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 KLF6Q99612 283 aaPredicted RBP13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 IL12RB2Q99665 862 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 SLC13A1Q9BZW2 595 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 NAT10Q9H0A0 1025 aaKnown RBP13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 RAB6CQ9H0N0 254 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 GPR27Q9NS67 375 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 SPASTQ9UBP0 616 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 DKK3Q9UBP4 350 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 SALL4Q9UJQ4 1053 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 MFHAS1Q9Y4C4 1052 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 ACTL7AQ9Y615 435 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 IGSF10Q6WRI0 2623 aa13.8□□□□□ -0.2
SNRPA1-204ENST00000558020 TDRD6O60522 2096 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 CELSR3Q9NYQ7 3312 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 TPP1O14773 563 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 RAD51BO15315 384 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 AQP9O43315 295 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 TM7SF2O76062 418 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 TMCC1O94876 653 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 GJB6O95452 261 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 GKP32189 559 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 ELP6Q0PNE2 266 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 SOWAHCQ53LP3 525 aaPredicted RBP13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 CFAP58Q5T655 872 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 ACAD10Q6JQN1 1059 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 UMODL1-AS1Q8N2C9 162 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 ZNF548Q8NEK5 533 aaPredicted RBP13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 SNIP1Q8TAD8 396 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 MAPK15Q8TD08 544 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 CXorf40AQ8TE69 158 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 SCG3Q8WXD2 468 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 CENPTQ96BT3 561 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 VCPIP1Q96JH7 1222 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 NCAPGQ9BPX3 1015 aa13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 CPEB1Q9BZB8 566 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-204ENST00000558020 MYLKQ15746 1914 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 TMEM110-MUSTN1A8MSY1 372 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms