RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 HMCESQ96FZ2 354 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 BMFQ96LC9 184 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 KLHL32Q96NJ5 620 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 CNPY3Q9BT09 278 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 NRSN2Q9GZP1 204 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 CATSPERBQ9H7T0 1116 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 GPR27Q9NS67 375 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 GGT7Q9UJ14 662 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 CLCA2Q9UQC9 943 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 ITPR1Q14643 2758 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 ARID1BQ8NFD5 2236 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-235ENST00000557740 SPTY2D1-AS1A0A0U1RR47 76 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 TCRBV5S1A1TA0A578 114 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 LRRC10BA6NIK2 292 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 RASA4BC9J798 803 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 FGF10O15520 208 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-235ENST00000557740 RASA4O43374 803 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 CKMT1AP12532 417 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 NME1P15531 152 aaKnown RBP14.84□□□□□ -0.03
SHMT2-235ENST00000557740 RPL7AP62424 266 aaKnown RBP14.84□□□□□ -0.03
SHMT2-235ENST00000557740 INSM1Q01101 510 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-235ENST00000557740 PDE1CQ14123 709 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-235ENST00000557740 PARP15Q460N3 678 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 LRRC73Q5JTD7 316 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 PPP1R2P3Q6NXS1 205 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 GDPD4Q6W3E5 623 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 MCOLN2Q8IZK6 566 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 ZNF548Q8NEK5 533 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-235ENST00000557740 LENG8Q96PV6 779 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-235ENST00000557740 NCAPGQ9BPX3 1015 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 DUSP23Q9BVJ7 150 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 C1QTNF7Q9BXJ2 289 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 TTYH3Q9C0H2 523 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 NAT10Q9H0A0 1025 aaKnown RBP14.84□□□□□ -0.03
SHMT2-235ENST00000557740 USP29Q9HBJ7 922 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 FZD10Q9ULW2 581 aa14.84□□□□□ -0.03
SHMT2-235ENST00000557740 A0A087WV48 116 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 SCAMP1O15126 338 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 SPINT1O43278 529 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 NEBLO76041 1014 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 CSF2P04141 144 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 ATP1A3P13637 1013 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 HOXB3P14651 431 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-235ENST00000557740 XPAP23025 273 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-235ENST00000557740 ABCG1P45844 678 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 DUSP3P51452 185 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-235ENST00000557740 THOP1P52888 689 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 YBEYP58557 167 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-235ENST00000557740 TPI1P60174 286 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 TYRO3Q06418 890 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 SERINC3Q13530 473 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 NCAPHQ15003 741 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 INO80DQ53TQ3 878 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-235ENST00000557740 ACAD10Q6JQN1 1059 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 KDM7AQ6ZMT4 941 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 APTXQ7Z2E3 356 aaKnown RBP14.83□□□□□ -0.04
SHMT2-235ENST00000557740 TTC7BQ86TV6 843 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 VPS36Q86VN1 386 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 CACTIN-AS1Q8N1I8 211 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 DCBLD1Q8N8Z6 715 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 CXorf40AQ8TE69 158 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 ASB12Q8WXK4 309 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 APOLD1Q96LR9 279 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 KLF6Q99612 283 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-235ENST00000557740 HSD3B7Q9H2F3 369 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 NOL6Q9H6R4 1146 aaKnown RBP14.83□□□□□ -0.04
SHMT2-235ENST00000557740 DONSONQ9NYP3 566 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 MYO6Q9UM54 1294 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 TRPM6Q9BX84 2022 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 DOCK9Q9BZ29 2069 aa14.83□□□□□ -0.04
SHMT2-235ENST00000557740 WASH4PA8MWX3 477 aa14.82□□□□□ -0.04
SHMT2-235ENST00000557740 K7ESM1 405 aa14.82□□□□□ -0.04
SHMT2-235ENST00000557740 AREL1O15033 823 aa14.82□□□□□ -0.04
SHMT2-235ENST00000557740 MT-CO3P00414 261 aa14.82□□□□□ -0.04
SHMT2-235ENST00000557740 JUNDP17535 347 aa14.82□□□□□ -0.04
SHMT2-235ENST00000557740 TNFAIP3P21580 790 aa14.82□□□□□ -0.04
SHMT2-235ENST00000557740 HTR7P34969 479 aa14.82□□□□□ -0.04
SHMT2-235ENST00000557740 PTK2BQ14289 1009 aa14.82□□□□□ -0.04
SHMT2-235ENST00000557740 RTP5Q14D33 572 aa14.82□□□□□ -0.04
SHMT2-235ENST00000557740 PPP1R15BQ5SWA1 713 aa14.82□□□□□ -0.04
SHMT2-235ENST00000557740 ZCCHC8Q6NZY4 707 aaKnown RBP14.82□□□□□ -0.04
SHMT2-235ENST00000557740 UMODL1-AS1Q8N2C9 162 aa14.82□□□□□ -0.04
SHMT2-235ENST00000557740 NETO2Q8NC67 525 aa14.82□□□□□ -0.04
SHMT2-235ENST00000557740 KLC2Q9H0B6 622 aa14.82□□□□□ -0.04
SHMT2-235ENST00000557740 CAAP1Q9H8G2 361 aa14.82□□□□□ -0.04
SHMT2-235ENST00000557740 DKK3Q9UBP4 350 aa14.82□□□□□ -0.04
SHMT2-235ENST00000557740 UBA2Q9UBT2 640 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-235ENST00000557740 TMCO5BA8MYB1 307 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 RRP8O43159 456 aaKnown RBP14.81□□□□□ -0.04
SHMT2-235ENST00000557740 AQP9O43315 295 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 OPA1O60313 960 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 MMP20O60882 483 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 TM7SF2O76062 418 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 GP1BAP07359 652 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 GIMD1P0DJR0 217 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 PSMA2P25787 234 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 IGFALSP35858 605 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 PFN3P60673 137 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 ELP6Q0PNE2 266 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 TPRG1LQ5T0D9 272 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms