RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 SUOXP51687 545 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 METAP1P53582 386 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 SLC25A11Q02978 314 aaKnown RBP14.01□□□□□ -0.17
VPS33B-206ENST00000557358 CCDC173Q0VFZ6 552 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 ZNF235Q14590 738 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 HLA-BQ31612 363 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 ATXN7L2Q5T6C5 722 aaPredicted RBP14.01□□□□□ -0.17
VPS33B-206ENST00000557358 PIP5KL1Q5T9C9 394 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 TTC7BQ86TV6 843 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 TXLNBQ8N3L3 684 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 SPC24Q8NBT2 197 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 C1orf216Q8TAB5 229 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 PDLIM2Q96JY6 352 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 SLC6A18Q96N87 628 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 ZNF830Q96NB3 372 aaPredicted RBP14.01□□□□□ -0.17
VPS33B-206ENST00000557358 ZNF599Q96NL3 588 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 C1QTNF7Q9BXJ2 289 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 MAK16Q9BXY0 300 aaKnown RBP14.01□□□□□ -0.17
VPS33B-206ENST00000557358 PACSIN1Q9BY11 444 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 CPEB1Q9BZB8 566 aaKnown RBP14.01□□□□□ -0.17
VPS33B-206ENST00000557358 ATP13A3Q9H7F0 1226 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 PCDH18Q9HCL0 1135 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 GDF3Q9NR23 364 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 MFHAS1Q9Y4C4 1052 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 ACTL7AQ9Y615 435 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 A0A1W2PQU0 124 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 C16orf96A6NNT2 1141 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 KCNK5O95279 499 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 MX2P20592 715 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 HNRNPA2B1P22626 353 aaKnown RBP14□□□□□ -0.17
VPS33B-206ENST00000557358 SERPINA4P29622 427 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 PPP2CBP62714 309 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 PPP2CAP67775 309 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 ELP6Q0PNE2 266 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 KIF19Q2TAC6 998 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 PSAPL1Q6NUJ1 521 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 CYP4V2Q6ZWL3 525 aaPredicted RBP14□□□□□ -0.17
VPS33B-206ENST00000557358 IQCHQ86VS3 1027 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 TMTC1Q8IUR5 882 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 TC2NQ8N9U0 490 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 MFSD2AQ8NA29 543 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 TRAF3IP1Q8TDR0 691 aaPredicted RBP14□□□□□ -0.17
VPS33B-206ENST00000557358 HCAR2Q8TDS4 363 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 CALR3Q96L12 384 aaKnown RBP14□□□□□ -0.17
VPS33B-206ENST00000557358 ZNF641Q96N77 438 aaPredicted RBP14□□□□□ -0.17
VPS33B-206ENST00000557358 KLHL32Q96NJ5 620 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 PANX2Q96RD6 677 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 TUBGCP5Q96RT8 1024 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 ZNF670Q9BS34 389 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 TM7SF3Q9NS93 570 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 IMPACTQ9P2X3 320 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 PCDHGB2Q9Y5G2 931 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 SPTBN2O15020 2390 aa14□□□□□ -0.17
VPS33B-206ENST00000557358 PCNX2A6NKB5 2137 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 A0A1W2PQ67 120 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 J3KR12 359 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 TM4SF5O14894 197 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 SLC31A1O15431 190 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 SPOPO43791 374 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 CSNK1DP48730 415 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 POLR2LP62875 67 aaKnown RBP13.99□□□□□ -0.17
VPS33B-206ENST00000557358 NSUN2Q08J23 767 aaKnown RBP eCLIP13.99□□□□□ -0.17
VPS33B-206ENST00000557358 LBRQ14739 615 aaKnown RBP13.99□□□□□ -0.17
VPS33B-206ENST00000557358 AFMIDQ63HM1 303 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 TIGD7Q6NT04 549 aaPredicted RBP13.99□□□□□ -0.17
VPS33B-206ENST00000557358 ERAP2Q6P179 960 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 BRAT1Q6PJG6 821 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 PARS2Q7L3T8 475 aaKnown RBP13.99□□□□□ -0.17
VPS33B-206ENST00000557358 CXorf40AQ8TE69 158 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 SETD7Q8WTS6 366 aaKnown RBP13.99□□□□□ -0.17
VPS33B-206ENST00000557358 KLHDC7BQ96G42 594 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 KLC2Q9H0B6 622 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 DKK3Q9UBP4 350 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 SNX11Q9Y5W9 270 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 PCDH15Q96QU1 1955 aa13.99□□□□□ -0.17
VPS33B-206ENST00000557358 LAMA1P25391 3075 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.98□□□□□ -0.17
VPS33B-206ENST00000557358 TLR4O00206 839 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 FLRT2O43155 660 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 MTA2O94776 668 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 KRT10P13645 584 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 TCF4P15884 667 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 ZFXP17010 805 aaPredicted RBP13.98□□□□□ -0.17
VPS33B-206ENST00000557358 CTSKP43235 329 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 AP1S1P61966 158 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 BCL2L1Q07817 233 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 CYTH1Q15438 398 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 HS1BP3Q53T59 392 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 SRLQ86TD4 932 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 DCP2Q8IU60 420 aaKnown RBP13.98□□□□□ -0.17
VPS33B-206ENST00000557358 ARHGAP12Q8IWW6 846 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 NPWQ8N729 165 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 DEFB124Q8NES8 71 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 EXOC2Q96KP1 924 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 SUV39H2Q9H5I1 410 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 PDFQ9HBH1 243 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 DDX56Q9NY93 547 aaKnown RBP13.98□□□□□ -0.17
VPS33B-206ENST00000557358 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.98□□□□□ -0.17
VPS33B-206ENST00000557358 FADS3Q9Y5Q0 445 aa13.98□□□□□ -0.17
VPS33B-206ENST00000557358 SHROOM3Q8TF72 1996 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms