RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 SLC25A45Q8N413 288 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 FAM181AQ8N9Y4 354 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 ZNF397Q8NF99 534 aaPredicted RBP8.87□□□□□ -0.99
VRK1-206ENST00000557222 NELFBQ8WX92 580 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 RNF34Q969K3 372 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 CRELD1Q96HD1 420 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 PPP1R13BQ96KQ4 1090 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 RPRD1AQ96P16 312 aaPredicted RBP8.87□□□□□ -0.99
VRK1-206ENST00000557222 FCRL3Q96P31 734 aaPredicted RBP8.87□□□□□ -0.99
VRK1-206ENST00000557222 NOX5Q96PH1 765 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 DUSP23Q9BVJ7 150 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 HDAC8Q9BY41 377 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 INTS2Q9H0H0 1204 aaKnown RBP8.87□□□□□ -0.99
VRK1-206ENST00000557222 FAM204AQ9H8W3 233 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 DDIT4Q9NX09 232 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 NLGN3Q9NZ94 848 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 NCKIPSDQ9NZQ3 722 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 VPS28Q9UK41 221 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 MAN1B1Q9UKM7 699 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 PAXBP1Q9Y5B6 917 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 TENM4Q6N022 2769 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 MAST4O15021 2626 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 DOCK9Q9BZ29 2069 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 NYNRINQ9P2P1 1898 aaKnown RBP8.86□□□□□ -0.99
VRK1-206ENST00000557222 GTPBP10A4D1E9 387 aaKnown RBP8.86□□□□□ -0.99
VRK1-206ENST00000557222 TRIM38O00635 465 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 SCAMP1O15126 338 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 RGS9O75916 674 aaPredicted RBP8.86□□□□□ -0.99
VRK1-206ENST00000557222 F9P00740 461 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 CALCAP01258 141 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 THEGLP0DJG4 465 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 HNRNPA2B1P22626 353 aaKnown RBP8.86□□□□□ -0.99
VRK1-206ENST00000557222 MAT2AP31153 395 aaKnown RBP8.86□□□□□ -0.99
VRK1-206ENST00000557222 CHRNA3P32297 505 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 METAP1P53582 386 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 TAS2R38P59533 333 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 TLE3Q04726 772 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 SLC20A2Q08357 652 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 MORC3Q14149 939 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 NAA30Q147X3 362 aaPredicted RBP8.86□□□□□ -0.99
VRK1-206ENST00000557222 ZNF284Q2VY69 593 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 BRMS1LQ5PSV4 323 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 PIP5KL1Q5T9C9 394 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 ZNF783Q6ZMS7 281 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 C11orf57Q6ZUT1 292 aaPredicted RBP8.86□□□□□ -0.99
VRK1-206ENST00000557222 SLC26A9Q7LBE3 791 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 ABI3BPQ7Z7G0 1075 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 ERICH1Q86X53 443 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 WDTC1Q8N5D0 677 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 C1orf131Q8NDD1 294 aaKnown RBP8.86□□□□□ -0.99
VRK1-206ENST00000557222 ZNF248Q8NDW4 579 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 OR2A12Q8NGT7 310 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 PGAP3Q96FM1 320 aaPredicted RBP8.86□□□□□ -0.99
VRK1-206ENST00000557222 PPP1R16AQ96I34 528 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 HIC2Q96JB3 615 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 C1orf74Q96LT6 269 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 DEPDC7Q96QD5 511 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 DYRK4Q9NR20 520 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 RAI2Q9Y5P3 530 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 HS3ST4Q9Y661 456 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 KCNMB2Q9Y691 235 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 PIEZO2Q9H5I5 2752 aa8.86□□□□□ -0.99
VRK1-206ENST00000557222 A0A1W2PQU0 124 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 DRGXA6NNA5 263 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 OPA1O60313 960 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 PAGE1O75459 146 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 DAB1O75553 588 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 PIAS2O75928 621 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 C1QL1O75973 258 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 GIMD1P0DJR0 217 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 SRCP12931 536 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 SCNN1AP37088 669 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 GATA4P43694 442 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 LSSP48449 732 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 CXCR3P49682 368 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 CLDN6P56747 220 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 HNRNPKP61978 463 aaKnown RBP eCLIP8.85□□□□□ -0.99
VRK1-206ENST00000557222 PITX1P78337 314 aaPredicted RBP8.85□□□□□ -0.99
VRK1-206ENST00000557222 GPLD1P80108 840 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 DAB2P98082 770 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 SLC6A3Q01959 620 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 RHDQ02161 417 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 PAK1Q13153 545 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 TAF5Q15542 800 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 BROXQ5VW32 411 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 KLHL10Q6JEL2 608 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 KIAA1161Q6NSJ0 714 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 TRIM65Q6PJ69 517 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 OLFML1Q6UWY5 402 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 ERN2Q76MJ5 926 aaKnown RBP8.85□□□□□ -0.99
VRK1-206ENST00000557222 CIR1Q86X95 450 aaPredicted RBP8.85□□□□□ -0.99
VRK1-206ENST00000557222 SPACA3Q8IXA5 215 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 DCAF4L2Q8NA75 395 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 ATP11CQ8NB49 1132 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 OR52K2Q8NGK3 314 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 SNRNP27Q8WVK2 155 aaKnown RBP8.85□□□□□ -0.99
VRK1-206ENST00000557222 ASB12Q8WXK4 309 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 SHC3Q92529 594 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 NT5C3BQ969T7 300 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 CPXM1Q96SM3 734 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms