RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PTK2Q05397 1052 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 DEUP1Q05D60 604 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 ARHGAP44Q17R89 818 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 LINC00303Q3SY05 128 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 ZNF805Q5CZA5 627 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 FAXCQ5TGI0 409 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 GJB7Q6PEY0 223 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 TRIM65Q6PJ69 517 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 USP53Q70EK8 1073 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 ELOA2Q8IYF1 753 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-221ENST00000556571 FBXO39Q8N4B4 442 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 SCG3Q8WXD2 468 aaKnown RBP12.08□□□□□ -0.48
ACTN1-221ENST00000556571 SHC3Q92529 594 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 ISG20Q96AZ6 181 aaKnown RBP12.08□□□□□ -0.48
ACTN1-221ENST00000556571 CENPTQ96BT3 561 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 ARHGEF26Q96DR7 871 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 LRRC61Q9BV99 259 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 STRADBQ9C0K7 418 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 TCEAL2Q9H3H9 227 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-221ENST00000556571 ZDHHC6Q9H6R6 413 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 SYNDIG1Q9H7V2 258 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 WDR70Q9NW82 654 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 CHMP5Q9NZZ3 219 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 MAN1B1Q9UKM7 699 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 ACSL6Q9UKU0 697 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 FCF1Q9Y324 198 aaKnown RBP12.08□□□□□ -0.48
ACTN1-221ENST00000556571 SFTPCP11686 197 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 TSHRP16473 764 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 TFE3P19532 575 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-221ENST00000556571 UGT1A5P35504 534 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 ABL2P42684 1182 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 BLKP51451 505 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 RNASE9P60153 205 aaKnown RBP12.07□□□□□ -0.48
ACTN1-221ENST00000556571 ARF5P84085 180 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 GNA12Q03113 381 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 PPARDQ03181 441 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 SLC25A52Q3SY17 297 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 PTPN20Q4JDL3 420 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 LVRNQ6Q4G3 990 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 RAB11FIP2Q7L804 512 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 FSTL5Q8N475 847 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-221ENST00000556571 RYBPQ8N488 228 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-221ENST00000556571 ARL10Q8N8L6 244 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 SGF29Q96ES7 293 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 HAPLN3Q96S86 360 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 ARHGAP9Q9BRR9 750 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 CRACR2AQ9BSW2 395 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 C1QTNF7Q9BXJ2 289 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 ZYG11BQ9C0D3 744 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 CLPBQ9H078 707 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 EPB41L5Q9HCM4 733 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 STARD5Q9NSY2 213 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 GULP1Q9UBP9 304 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 APEX2Q9UBZ4 518 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 ZNF212Q9UDV6 495 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 DOLKQ9UPQ8 538 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 CTNND2Q9UQB3 1225 aa12.07□□□□□ -0.48
ACTN1-221ENST00000556571 AREL1O15033 823 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 CASC3O15234 703 aaKnown RBP12.06□□□□□ -0.48
ACTN1-221ENST00000556571 NOBOXO60393 691 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 FGFR1OPO95684 399 aaKnown RBP12.06□□□□□ -0.48
ACTN1-221ENST00000556571 POP4O95707 220 aaKnown RBP12.06□□□□□ -0.48
ACTN1-221ENST00000556571 CD160O95971 181 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 SLC9A1P19634 815 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 BMP6P22004 513 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 SCNN1AP37088 669 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 ETFBP38117 255 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 EIF4A3P38919 411 aaKnown RBP12.06□□□□□ -0.48
ACTN1-221ENST00000556571 STX17P56962 302 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 GEMIN4P57678 1058 aaKnown RBP12.06□□□□□ -0.48
ACTN1-221ENST00000556571 PAK1Q13153 545 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 POLD3Q15054 466 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-221ENST00000556571 ELOCQ15369 112 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 ARTNQ5T4W7 220 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 MACC1Q6ZN28 852 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 GBP6Q6ZN66 633 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 ATG14Q6ZNE5 492 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 VPS36Q86VN1 386 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 JAMLQ86YT9 394 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 SDR16C5Q8N3Y7 309 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 TMEM74Q96NL1 305 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 GFM1Q96RP9 751 aaKnown RBP12.06□□□□□ -0.48
ACTN1-221ENST00000556571 TBCBQ99426 244 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 OSBPL1AQ9BXW6 950 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 TM6SF2Q9BZW4 377 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 TMPRSS4Q9NRS4 437 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 PPARGC1AQ9UBK2 798 aaKnown RBP12.06□□□□□ -0.48
ACTN1-221ENST00000556571 GGT7Q9UJ14 662 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 PNMA8BQ9ULN7 279 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-221ENST00000556571 ITM2BQ9Y287 266 aa12.06□□□□□ -0.48
ACTN1-221ENST00000556571 UBR5O95071 2799 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-221ENST00000556571 BOD1L1Q8NFC6 3051 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 TMEM110-MUSTN1A8MSY1 372 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 D6RAR5 112 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 KRIT1O00522 736 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 TERTO14746 1132 aaKnown RBP12.05□□□□□ -0.48
ACTN1-221ENST00000556571 NVLO15381 856 aaKnown RBP12.05□□□□□ -0.48
ACTN1-221ENST00000556571 TM7SF2O76062 418 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 GSRP00390 522 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 ALPIP09923 528 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms