RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 TIGD7Q6NT04 549 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-237ENST00000556274 ZNF662Q6ZS27 426 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 PAQR9Q6ZVX9 377 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 RSRC2Q7L4I2 434 aaKnown RBP4.87□□□□□ -1.63
ATXN3-237ENST00000556274 LIMS2Q7Z4I7 341 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 MON1AQ86VX9 555 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 TMC8Q8IU68 726 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 MFSD6LQ8IWD5 586 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 ZC3H3Q8IXZ2 948 aaKnown RBP4.87□□□□□ -1.63
ATXN3-237ENST00000556274 ZZZ3Q8IYH5 903 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 CMTM8Q8IZV2 173 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 FUKQ8N0W3 1084 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 KLHL36Q8N4N3 616 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 CELF5Q8N6W0 485 aaKnown RBP4.87□□□□□ -1.63
ATXN3-237ENST00000556274 NEK11Q8NG66 645 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 NDRG1Q92597 394 aaKnown RBP4.87□□□□□ -1.63
ATXN3-237ENST00000556274 ELSPBP1Q96BH3 223 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 SPATA17Q96L03 361 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 C8orf48Q96LL4 319 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 PKMYT1Q99640 499 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 HNRNPABQ99729 332 aaKnown RBP4.87□□□□□ -1.63
ATXN3-237ENST00000556274 LRFN3Q9BTN0 628 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 MIS12Q9H081 205 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 FBXO44Q9H4M3 255 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 IFT22Q9H7X7 185 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 ZMAT4Q9H898 229 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 NLRC4Q9NPP4 1024 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 TLR8Q9NR97 1041 aaKnown RBP4.87□□□□□ -1.63
ATXN3-237ENST00000556274 HEBP1Q9NRV9 189 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 TDP1Q9NUW8 608 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 SEPT11Q9NVA2 429 aaKnown RBP4.87□□□□□ -1.63
ATXN3-237ENST00000556274 DUS2Q9NX74 493 aaKnown RBP4.87□□□□□ -1.63
ATXN3-237ENST00000556274 EPS15L1Q9UBC2 864 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 RAPGEFL1Q9UHV5 662 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 CDC42EP3Q9UKI2 254 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 KIAA1257Q9ULG3 409 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 NDRG2Q9UN36 371 aaKnown RBP4.87□□□□□ -1.63
ATXN3-237ENST00000556274 COQ4Q9Y3A0 265 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 EML5Q05BV3 1969 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 SPAG17Q6Q759 2223 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 COL4A3Q01955 1670 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 ANKRD36A6QL64 1941 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 DOCK4Q8N1I0 1966 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 DOCK9Q9BZ29 2069 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 ANHXE9PGG2 379 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 M0QYV0 167 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 FOXN3O00409 490 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-237ENST00000556274 ECI2O75521 394 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 NOL4O94818 638 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 TBX18O95935 607 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 PRLP01236 227 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 DCNP07585 359 aaKnown RBP4.86□□□□□ -1.63
ATXN3-237ENST00000556274 PNMA6AP0CW24 399 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-237ENST00000556274 RALAP11233 206 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 RARGP13631 454 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 CPEP16870 476 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 BPIP17213 487 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 HOXA5P20719 270 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 DDX6P26196 483 aaKnown RBP eCLIP4.86□□□□□ -1.63
ATXN3-237ENST00000556274 LSP1P33241 339 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 ATP5C1P36542 298 aaKnown RBP4.86□□□□□ -1.63
ATXN3-237ENST00000556274 ID4P47928 161 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 PPP3CCP48454 512 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 IFNAR2P48551 515 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 KLK7P49862 253 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 TKTL1P51854 596 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 COPB1P53618 953 aaKnown RBP4.86□□□□□ -1.63
ATXN3-237ENST00000556274 SLC5A3P53794 718 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 RNASE9P60153 205 aaKnown RBP4.86□□□□□ -1.63
ATXN3-237ENST00000556274 POLR2FP61218 127 aaKnown RBP4.86□□□□□ -1.63
ATXN3-237ENST00000556274 NFKB2Q00653 900 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 INCA1Q0VD86 236 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 EFEMP1Q12805 493 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 LRRC32Q14392 662 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 DRAP1Q14919 205 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-237ENST00000556274 SYCP1Q15431 976 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 CNGA2Q16280 664 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 KLHL40Q2TBA0 621 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 ARHGAP29Q52LW3 1261 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 TAF3Q5VWG9 929 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 TRIM68Q6AZZ1 485 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 TRIM65Q6PJ69 517 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 VITQ6UXI7 678 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 CLEC20AQ6ZU45 233 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 TPRG1Q6ZUI0 275 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 CACNA2D4Q7Z3S7 1137 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 TMEM150AQ86TG1 271 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 PHYKPLQ8IUZ5 450 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 KBTBD2Q8IY47 623 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 SIX6OS1Q8N1H7 587 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 ANKRD52Q8NB46 1076 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 LMO3Q8TAP4 145 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 BPIFB1Q8TDL5 484 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 RNF139Q8WU17 664 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 TFAP2BQ92481 460 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 GOLGA1Q92805 767 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 USP13Q92995 863 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-237ENST00000556274 SECISBP2LQ93073 1101 aaKnown RBP4.86□□□□□ -1.63
ATXN3-237ENST00000556274 FAM81BQ96LP2 452 aa4.86□□□□□ -1.63
ATXN3-237ENST00000556274 SPAG5Q96R06 1193 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms