RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 GJB6O95452 261 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 LSM8O95777 96 aaKnown RBP14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 CELA2BP08218 269 aaPredicted RBP14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 JUNDP17535 347 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 ADRA1BP35368 520 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 RECQLP46063 649 aaPredicted RBP14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 DUSP3P51452 185 aaPredicted RBP14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 DNA2P51530 1060 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 TMPRSS3P57727 454 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 BPIFB4P59827 614 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 ATP11AP98196 1134 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 PTP4A2Q12974 167 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 CCDC14Q49A88 953 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 HS1BP3Q53T59 392 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 HSP90AA4PQ58FG1 418 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 ZNF805Q5CZA5 627 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 C3orf38Q5JPI3 329 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 LRRC73Q5JTD7 316 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 ARHGAP40Q5TG30 622 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 CRTC1Q6UUV9 634 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 LEKR1Q6ZMV7 388 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 EFL1Q7Z2Z2 1120 aaKnown RBP14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 LSMEM2Q8N112 164 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 DENND6BQ8NEG7 585 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 JOSD2Q8TAC2 188 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 SLC20A1Q8WUM9 679 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 CENPIQ92674 756 aaPredicted RBP14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 TUBGCP2Q9BSJ2 902 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 LRRC61Q9BV99 259 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 KLC2Q9H0B6 622 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 MBNL1Q9NR56 388 aaKnown RBP14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 METTL5Q9NRN9 209 aaKnown RBP14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 OR12D3Q9UGF7 316 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 PAXBP1Q9Y5B6 917 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 UNC13CQ8NB66 2214 aa14.58□□□□□ -0.08
CHMP4BP1-201ENST00000556017 CPED1A4D0V7 1026 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 CYSRT1A8MQ03 144 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 F8VZ95 297 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 KLK10O43240 276 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 CYP1A1P04798 512 aaPredicted RBP14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 UGT2B4P06133 528 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 UCHL3P15374 230 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 HDAC4P56524 1084 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 C1orf61Q13536 156 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 RAPGEF1Q13905 1077 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 DPCR1Q3MIW9 517 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 ATXN7L2Q5T6C5 722 aaPredicted RBP14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 NAA35Q5VZE5 725 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 KCTD16Q68DU8 428 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 ZNF605Q86T29 641 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 CCDC185Q8N715 623 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 MLKLQ8NB16 471 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 TP53I13Q8NBR0 393 aaPredicted RBP14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 NETO2Q8NC67 525 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 OR2AP1Q8NGE2 309 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 GPT2Q8TD30 523 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 LMX1AQ8TE12 382 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 KCNE4Q8WWG9 221 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 FUBP1Q96AE4 644 aaKnown RBP14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 RAB7BQ96AH8 199 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 WBP1Q96G27 269 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 GANQ9H2C0 597 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 TMEM248Q9NWD8 314 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 DNAI1Q9UI46 699 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 RABGEF1Q9UJ41 708 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 PCDHGA8Q9Y5G5 932 aa14.57□□□□□ -0.08
CHMP4BP1-201ENST00000556017 C2CD4BA6NLJ0 364 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 LMO7DNF2Z398 122 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 NTN3O00634 580 aaPredicted RBP14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 FPGTO14772 594 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 EFSO43281 561 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 LRIG2O94898 1065 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 GSRP00390 522 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 RHOQP17081 205 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 MMP8P22894 467 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 FMO1Q01740 532 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 LY6DQ14210 128 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 MYLK3Q32MK0 819 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 PHLDB2Q86SQ0 1253 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 CLEC14AQ86T13 490 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 ZSCAN30Q86W11 494 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 RXFP2Q8WXD0 754 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 KLHL32Q96NJ5 620 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 STK33Q9BYT3 514 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 DPH1Q9BZG8 443 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 ABCG4Q9H172 646 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 SAMSN1Q9NSI8 373 aaKnown RBP14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 TMEM51Q9NW97 253 aa14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 ARHGEF17Q96PE2 2063 aaPredicted RBP14.56□□□□□ -0.08
CHMP4BP1-201ENST00000556017 TLN1Q9Y490 2541 aaKnown RBP14.55□□□□□ -0.08
CHMP4BP1-201ENST00000556017 H3BM21 787 aa14.55□□□□□ -0.08
CHMP4BP1-201ENST00000556017 K7ENP7 123 aa14.55□□□□□ -0.08
CHMP4BP1-201ENST00000556017 KRIT1O00522 736 aa14.55□□□□□ -0.08
CHMP4BP1-201ENST00000556017 MUSKO15146 869 aa14.55□□□□□ -0.08
CHMP4BP1-201ENST00000556017 EPHB6O15197 1021 aa14.55□□□□□ -0.08
CHMP4BP1-201ENST00000556017 YY2O15391 372 aa14.55□□□□□ -0.08
CHMP4BP1-201ENST00000556017 MMP20O60882 483 aa14.55□□□□□ -0.08
CHMP4BP1-201ENST00000556017 TIMP2P16035 220 aa14.55□□□□□ -0.08
CHMP4BP1-201ENST00000556017 TSHRP16473 764 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms