RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 SH2D3CQ8N5H7 860 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 SLC25A41Q8N5S1 370 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 ZNF366Q8N895 744 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 FBXO36Q8NEA4 188 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 TADA1Q96BN2 335 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 MRGPRX3Q96LB0 322 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 TBL1YQ9BQ87 522 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 FSD1LQ9BXM9 530 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 FOXP3Q9BZS1 431 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 TSPYL1Q9H0U9 437 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 EPB41L4BQ9H329 900 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 MTG2Q9H4K7 406 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 ZDHHC4Q9NPG8 344 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 GOLGA6AQ9NYA3 693 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 NINJ2Q9NZG7 142 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 EVLQ9UI08 416 aaPredicted RBP10.33□□□□□ -0.76
SRP54-208ENST00000555557 CHMP2BQ9UQN3 213 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 HS3ST2Q9Y278 367 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 PCDHGC4Q9Y5F7 938 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 ERI2A8K979 691 aaKnown RBP10.33□□□□□ -0.76
SRP54-208ENST00000555557 TTC34A8MYJ7 566 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 E7ESA3 106 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 PSMD3O43242 534 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 SERPINF2P08697 491 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 MAGEA3P43357 314 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 GEMIN4P57678 1058 aaKnown RBP10.33□□□□□ -0.76
SRP54-208ENST00000555557 SULT2A1Q06520 285 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 NSUN2Q08J23 767 aaKnown RBP eCLIP10.33□□□□□ -0.76
SRP54-208ENST00000555557 SLC29A2Q14542 456 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 PTPRNQ16849 979 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 LEXMQ3ZCV2 418 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 CERCAMQ5T4B2 595 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 IER5LQ5T953 404 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 NAPEPLDQ6IQ20 393 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 DENND5AQ6IQ26 1287 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 HDXQ7Z353 690 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 CSGALNACT1Q8TDX6 532 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 PYROXD1Q8WU10 500 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 MYO19Q96H55 970 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 SIGLEC10Q96LC7 697 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 NUDCD1Q96RS6 583 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 CASS4Q9NQ75 786 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 ELOVL2Q9NXB9 296 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 CHKBQ9Y259 395 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 MAD1L1Q9Y6D9 718 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 RIPK2O43353 540 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 NARSO43776 548 aaKnown RBP10.32□□□□□ -0.76
SRP54-208ENST00000555557 ATP9BO43861 1147 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 ATP5BP06576 529 aaKnown RBP10.32□□□□□ -0.76
SRP54-208ENST00000555557 DLDP09622 509 aaKnown RBP10.32□□□□□ -0.76
SRP54-208ENST00000555557 MLNP12872 115 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 CASC4Q6P4E1 433 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 C22orf39Q6P5X5 142 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 NCEH1Q6PIU2 408 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 RANBP10Q6VN20 620 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 Q6ZVU0 165 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 SRLQ86TD4 932 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 PLCD3Q8N3E9 789 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 RYBPQ8N488 228 aaPredicted RBP10.32□□□□□ -0.76
SRP54-208ENST00000555557 MREGQ8N565 214 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 TERB1Q8NA31 727 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 OR2W6PQ8NHA6 318 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 WFIKKN2Q8TEU8 576 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 PABPC3Q9H361 631 aaKnown RBP10.32□□□□□ -0.76
SRP54-208ENST00000555557 LRRC4CQ9HCJ2 640 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 XAB2Q9HCS7 855 aaKnown RBP10.32□□□□□ -0.76
SRP54-208ENST00000555557 HEBP1Q9NRV9 189 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 VPS45Q9NRW7 570 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 SYBUQ9NX95 663 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 TEX264Q9Y6I9 313 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 VCANP13611 3396 aa10.32□□□□□ -0.76
SRP54-208ENST00000555557 CCDC78A2IDD5 438 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 WASH3PC4AMC7 463 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 KAT7O95251 611 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 PIGNO95427 931 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 TTC4O95801 387 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 SHBGP04278 402 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 PRKCGP05129 697 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 PDHA1P08559 390 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 SSTR1P30872 391 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 GALK1P51570 392 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 GPX6P59796 221 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 FAM193AP78312 1265 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 CDK18Q07002 472 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 CDH17Q12864 832 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 TRAF2Q12933 501 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 GALNT3Q14435 633 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 CCDC38Q502W7 563 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 EMC10Q5UCC4 262 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 TXNDC11Q6PKC3 985 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 CES3Q6UWW8 571 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 TRMT10CQ7L0Y3 403 aaKnown RBP10.31□□□□□ -0.76
SRP54-208ENST00000555557 LINC00523Q86TU6 105 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 CAMK1DQ8IU85 385 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 RELL1Q8IUW5 271 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 OR2AP1Q8NGE2 309 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 FRS2Q8WU20 508 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 PDCD6IPQ8WUM4 868 aaKnown RBP10.31□□□□□ -0.76
SRP54-208ENST00000555557 ERLEC1Q96DZ1 483 aa10.31□□□□□ -0.76
SRP54-208ENST00000555557 IFT43Q96FT9 208 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms