RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	NKIRAS2	Q9NYR9	191 aa		4.62	□□□□□ -1.67
KTN1-222	ENST00000555506	ZNF215	Q9UL58	517 aa	Predicted RBP	4.62	□□□□□ -1.67
KTN1-222	ENST00000555506	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.62	□□□□□ -1.67
KTN1-222	ENST00000555506	FAM237B	A0A1B0GVD1	139 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506		A0A1W2PQF6	199 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	C2CD4B	A6NLJ0	364 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	MYO1G	B0I1T2	1018 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506		B4DLN1	442 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	EIF3CL	B5ME19	914 aa	Known RBP	4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	BCAT2	O15382	392 aa	Predicted RBP	4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	PAGE4	O60829	102 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	PROP1	O75360	226 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	RBMXL2	O75526	392 aa	Known RBP	4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	SEC31A	O94979	1220 aa	Known RBP	4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	WNT1	P04628	370 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	RARG	P13631	454 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	DPP6	P42658	865 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	CLCNKB	P51801	687 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	ZNF268	Q14587	947 aa	Predicted RBP	4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	VEPH1	Q14D04	833 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	RNPS1	Q15287	305 aa	Known RBP	4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	DPCR1	Q3MIW9	517 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	TMEM154	Q6P9G4	183 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	AAGAB	Q6PD74	315 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	ADGRF4	Q8IZF3	695 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	SRBD1	Q8N5C6	995 aa	Known RBP	4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	LSMEM1	Q8N8F7	131 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	OR4N2	Q8NGD1	307 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	POMGNT1	Q8WZA1	660 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	ADAM18	Q9Y3Q7	739 aa		4.61	□□□□□ -1.67
KTN1-222	ENST00000555506	TRBV5-7	A0A0A0MS05	114 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	LINC01548	A6NM66	108 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	FOXO6	A8MYZ6	492 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	RHOD	O00212	210 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	EBAG9	O00559	213 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	RNMT	O43148	476 aa	Known RBP	4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	LIAS	O43766	372 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	ZNF500	O60304	480 aa	Predicted RBP	4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	HNRNPCL1	O60812	293 aa	Known RBP	4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	TMCC1	O94876	653 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	PTPN2	P17706	415 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	ITGB6	P18564	788 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	CIITA	P33076	1130 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	GABRB2	P47870	512 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	GNAQ	P50148	359 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	SLC18A2	Q05940	514 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	PMPCA	Q10713	525 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	CHAF1B	Q13112	559 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	CRYM	Q14894	314 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	ALG10	Q5BKT4	473 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	ALG10B	Q5I7T1	473 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	MEX3C	Q5U5Q3	659 aa	Known RBP	4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	ISM2	Q6H9L7	571 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	KLHL35	Q6PF15	583 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	SARM1	Q6SZW1	724 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	ZNF788	Q6ZQV5	615 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	FAM57B	Q71RH2	274 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	UBE2Q1	Q7Z7E8	422 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	TRIM74	Q86UV6	250 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	TRIM73	Q86UV7	250 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	ARHGAP12	Q8IWW6	846 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	SEMA6D	Q8NFY4	1073 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	WIPF2	Q8TF74	440 aa	Predicted RBP	4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	GTF3C6	Q969F1	213 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	PLSCR4	Q9NRQ2	329 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	ADARB2	Q9NS39	739 aa	Known RBP	4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	HAO1	Q9UJM8	370 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	PCDHGB4	Q9UN71	923 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	LAMP3	Q9UQV4	416 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	TMEM5	Q9Y2B1	443 aa		4.6	□□□□□ -1.67
KTN1-222	ENST00000555506	KAT6B	Q8WYB5	2073 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	USP17L23	D6RBM5	183 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	SNAP23	O00161	211 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	STARD3NL	O95772	234 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	AKR1B1	P15121	316 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	EDN2	P20800	178 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	ACSL1	P33121	698 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	PTGER1	P34995	402 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	GARS	P41250	739 aa	Known RBP	4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	CENPA	P49450	140 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	PRAME	P78395	509 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	CFHR1	Q03591	330 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	EPS8	Q12929	822 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	CSTF3	Q12996	717 aa	Known RBP	4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	STIM1	Q13586	685 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	TTC39A	Q5SRH9	613 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	MFSD4B	Q5TF39	518 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	CPLX2	Q6PUV4	134 aa	Known RBP	4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	TBC1D26	Q86UD7	250 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	DDIAS	Q8IXT1	998 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	C1orf131	Q8NDD1	294 aa	Known RBP	4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	PSPC1	Q8WXF1	523 aa	Known RBP	4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	FEM1C	Q96JP0	617 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	CMTM3	Q96MX0	182 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	WDFY2	Q96P53	400 aa		4.59	□□□□□ -1.67
KTN1-222	ENST00000555506	SH2D4A	Q9H788	454 aa		4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms