RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 PAK5Q9P286 719 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 EVLQ9UI08 416 aaPredicted RBP16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 TTLL3Q9Y4R7 772 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 WASF2Q9Y6W5 498 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 ATG2BQ96BY7 2078 aa16.64■□□□□ 0.26
SPTLC2-203ENST00000554901 A0A1W2PQ67 120 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 TCRBV21S2A2A0A5A6 115 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 SOCS5O75159 536 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 ECEL1O95672 775 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 APBB3O95704 486 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 ADH1BP00325 375 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 IFNB1P01574 187 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 SERPINF2P08697 491 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 CA4P22748 312 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 SERPINA4P29622 427 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 CD68P34810 354 aaPredicted RBP16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 NUBP1P53384 320 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 SATB1Q01826 763 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 DHX34Q14147 1143 aaKnown RBP16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 PARP6Q2NL67 630 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 TMPRSS6Q8IU80 811 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 CEP112Q8N8E3 955 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 TMEM105Q8N8V8 129 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 CHST14Q8NCH0 376 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 CCDC110Q8TBZ0 833 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 CCHCR1Q8TD31 782 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 SPOCK2Q92563 424 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 TADA1Q96BN2 335 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 PPP1R16AQ96I34 528 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 MKRN2Q9H000 416 aaKnown RBP16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 DDX47Q9H0S4 455 aaKnown RBP16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 ZDHHC6Q9H6R6 413 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 NOD2Q9HC29 1040 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 PCDH9Q9HC56 1237 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 SPATA6Q9NWH7 488 aaPredicted RBP16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 RSPH14Q9UHP6 348 aa16.64■□□□□ 0.25
SPTLC2-203ENST00000554901 ANXA9O76027 345 aa16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 NFKB1P19838 968 aa16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 C5AR1P21730 350 aa16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 DSC2Q02487 901 aa16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 BCL2L1Q07817 233 aa16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 PRPSAP1Q14558 356 aa16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 RASSF3Q86WH2 238 aa16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 CUL9Q8IWT3 2517 aa16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 KLHDC8BQ8IXV7 354 aa16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 PIP4K2CQ8TBX8 421 aa16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 PRCCQ92733 491 aaPredicted RBP16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 VOPP1Q96AW1 172 aa16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 MRGPRX1Q96LB2 322 aa16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 L2HGDHQ9H9P8 463 aa16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 PRMT8Q9NR22 394 aaPredicted RBP16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 DKK3Q9UBP4 350 aa16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 EBF1Q9UH73 591 aa16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 AAR2Q9Y312 384 aaKnown RBP16.63■□□□□ 0.25
SPTLC2-203ENST00000554901 CCDC163A0A0D9SF12 145 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 GOLGA6CA6NDK9 693 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 GOLGA6BA6NDN3 693 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 LAMTOR5O43504 91 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 LEFTY1O75610 366 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 IL1BP01584 269 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 CTSLP07711 333 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 GOLGA6DP0CG33 693 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 GABRG2P18507 467 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 AVPR2P30518 371 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 FDFT1P37268 417 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 RPS14P62263 151 aaKnown RBP16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 NIPAL4Q0D2K0 466 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 CCDC15Q0P6D6 951 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 CST6Q15828 149 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 ARSIQ5FYB1 569 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 GDPD4Q6W3E5 623 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 MAATS1Q7Z4T9 603 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 MMAAQ8IVH4 418 aaKnown RBP16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 C1orf210Q8IVY1 113 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 DTWD2Q8NBA8 298 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 SIPA1Q96FS4 1042 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 SUV39H2Q9H5I1 410 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 C11orf16Q9NQ32 467 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 GOLGA6AQ9NYA3 693 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 FAM153AQ9UHL3 310 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 NEU2Q9Y3R4 380 aa16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 ARIH1Q9Y4X5 557 aaPredicted RBP16.62■□□□□ 0.25
SPTLC2-203ENST00000554901 CTAGE15A4D2H0 777 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 HTRA2O43464 458 aaPredicted RBP16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 DNTTP04053 509 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 MMP2P08253 660 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 CTAGE8P0CG41 777 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 NDUFV2P19404 249 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 ITGB7P26010 798 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 CD86P42081 329 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 SUOXP51687 545 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 NRLP54845 237 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 GEMP55040 296 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 SKOR1P84550 965 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 DR1Q01658 176 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 MPP3Q13368 585 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 TTC31Q49AM3 519 aaPredicted RBP16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 ZNF805Q5CZA5 627 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 BRAT1Q6PJG6 821 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 USP30Q70CQ3 517 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms