RNA–Protein interactions for RNA: ENST00000554666.5

PAPOLA-209, Transcript of poly(A) polymerase alpha, human

TSL 2

Gene PAPOLA, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-209	ENST00000554666	KDM4E	B2RXH2	506 aa	Predicted RBP	4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	ANP32C	O43423	234 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	GAGE7	O76087	117 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	GAGE12F	P0CL80	117 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	GAGE12G	P0CL81	117 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	GAGE12I	P0CL82	117 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	TTK	P33981	857 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	GAGE1	Q13065	139 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	GAGE4	Q13068	117 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	CTTN	Q14247	550 aa	Known RBP	4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	MYBPC2	Q14324	1141 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	SLC18A3	Q16572	532 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	FBXO47	Q5MNV8	452 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	SH2D4B	Q5SQS7	431 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	PRSS57	Q6UWY2	283 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	IL20RB	Q6UXL0	311 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	CEP70	Q8NHQ1	597 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	LMO3	Q8TAP4	145 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	HSPH1	Q92598	858 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	CLK4	Q9HAZ1	481 aa	Known RBP	4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	KCNG2	Q9UJ96	466 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	PAM16	Q9Y3D7	125 aa		4.33	□□□□□ -1.72
PAPOLA-209	ENST00000554666	C17orf113	A0A1B0GUU1	675 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	WNT9B	O14905	357 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	TCEA3	O75764	348 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	KRT36	O76013	467 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	FMO4	P31512	558 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	PTPN9	P43378	593 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	PEX5	P50542	639 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	TRAF3	Q13114	568 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	WBP2NL	Q6ICG8	309 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666		Q6ZTC4	211 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	PRSS45	Q7RTY3	260 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	ARMC9	Q7Z3E5	817 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	C2CD5	Q86YS7	1000 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	SFTPA2	Q8IWL1	248 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	DNAAF1	Q8NEP3	725 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	RAB40A	Q8WXH6	277 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	HES6	Q96HZ4	224 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	TXNDC15	Q96J42	360 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	CD180	Q99467	661 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	IL25	Q9H293	177 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	TMEM51	Q9NW97	253 aa		4.32	□□□□□ -1.72
PAPOLA-209	ENST00000554666	IGLV5-37	A0A075B6J1	123 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	LOC102724159	A0A0B4J2E5	919 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	DYTN	A2CJ06	578 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	SRRM3	A6NNA2	597 aa	Predicted RBP	4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666		B9A039	149 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	LDB3	O75112	727 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	ZBTB11	O95625	1053 aa	Predicted RBP	4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	LDHA	P00338	332 aa	Known RBP	4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	WEE2	P0C1S8	567 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	PTPN2	P17706	415 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	LIFR	P42702	1097 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	TRAPPC10	P48553	1259 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	BNC1	Q01954	994 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	HYAL1	Q12794	435 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	COASY	Q13057	564 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	PWP2	Q15269	919 aa	Known RBP	4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	C10orf62	Q5T681	223 aa	Predicted RBP	4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	CUZD1	Q86UP6	607 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	AADAT	Q8N5Z0	425 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	NEXN-AS1	Q8NBZ9	246 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	TMED6	Q8WW62	240 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	TRIB2	Q92519	343 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	LRFN5	Q96NI6	719 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	C1QTNF4	Q9BXJ3	329 aa		4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	STN1	Q9H668	368 aa	Known RBP	4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	TLR8	Q9NR97	1041 aa	Known RBP	4.31	□□□□□ -1.72
PAPOLA-209	ENST00000554666	PLSCR5	A0PG75	271 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	ARHGAP10	A1A4S6	786 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	LINC01553	A4QN01	128 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	VWA3A	A6NCI4	1184 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	FAM90A7P	A6NKC0	464 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	FAM90A22P	A8MWA6	464 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	FAM90A12P	A8MX19	464 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	FAM90A23P	A8MXZ1	464 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	VNN2	O95498	520 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	CH25H	O95992	272 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	SNRNP70	P08621	437 aa	Known RBP	4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	ZNF8	P17098	575 aa	Predicted RBP	4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	RXRA	P19793	462 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	RPL3	P39023	403 aa	Known RBP	4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	GPD2	P43304	727 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	COMP	P49747	757 aa	Predicted RBP	4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	ERVFC1-1	P60608	527 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	YWHAZ	P63104	245 aa	Known RBP	4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	GRAMD1B	Q3KR37	738 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	NAPEPLD	Q6IQ20	393 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	CCDC129	Q6ZRS4	1044 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	CPXM2	Q8N436	756 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	RASSF8	Q8NHQ8	419 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	GPT2	Q8TD30	523 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	NOC3L	Q8WTT2	800 aa	Known RBP	4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	CNOT9	Q92600	299 aa	Known RBP	4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	TBC1D20	Q96BZ9	403 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	IGSF21	Q96ID5	467 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	TWNK	Q96RR1	684 aa		4.3	□□□□□ -1.72
PAPOLA-209	ENST00000554666	PYM1	Q9BRP8	204 aa	Known RBP	4.3	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms