RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 ZNF571Q7Z3V5 609 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-215ENST00000554656 ABI3BPQ7Z7G0 1075 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 FAM131BQ86XD5 332 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 KIF18AQ8NI77 898 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 EPS8L1Q8TE68 723 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 SLC20A1Q8WUM9 679 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 CPA5Q8WXQ8 436 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 C18orf8Q96DM3 657 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 KLHDC7BQ96G42 594 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 C1orf74Q96LT6 269 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 HDAC8Q9BY41 377 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 GPR27Q9NS67 375 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 PCDHA13Q9Y5I0 950 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 U3KQA8 63 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 KALRNO60229 2985 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 A0A087X0T9 212 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 ILVBLA1L0T0 632 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 POM121BA6NF01 834 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 FFAR2O15552 330 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 SPINT1O43278 529 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 MAGEC1O60732 1142 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 PIAS2O75928 621 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 GJB6O95452 261 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 F9P00740 461 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 PRNPP04156 253 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 FAM228BP0C875 321 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 CDK4P11802 303 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 MYF5P13349 255 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 HNRNPA2B1P22626 353 aaKnown RBP10.77□□□□□ -0.69
SHMT2-215ENST00000554656 OR1E1P30953 314 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 ACVRL1P37023 503 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 EIF2S3P41091 472 aaKnown RBP10.77□□□□□ -0.69
SHMT2-215ENST00000554656 CLCN6P51797 869 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 SNX16P57768 344 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 ZNF211Q13398 564 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-215ENST00000554656 ILKQ13418 452 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 KIF26BQ2KJY2 2108 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 TPRG1LQ5T0D9 272 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 C6orf118Q5T5N4 469 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 MANEALQ5VSG8 457 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 NEK5Q6P3R8 708 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 PARS2Q7L3T8 475 aaKnown RBP10.77□□□□□ -0.69
SHMT2-215ENST00000554656 ERICH1Q86X53 443 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 RNF10Q8N5U6 811 aaKnown RBP10.77□□□□□ -0.69
SHMT2-215ENST00000554656 EMC1Q8N766 993 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 DCBLD1Q8N8Z6 715 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 OR4C6Q8NH72 309 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 SLC30A5Q8TAD4 765 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 CALR3Q96L12 384 aaKnown RBP10.77□□□□□ -0.69
SHMT2-215ENST00000554656 BMFQ96LC9 184 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 HAPLN3Q96S86 360 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 CALN1Q9BXU9 219 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 MAGEB5Q9BZ81 275 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 NRSN2Q9GZP1 204 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 METTL5Q9NRN9 209 aaKnown RBP10.77□□□□□ -0.69
SHMT2-215ENST00000554656 NDFIP2Q9NV92 336 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 KLHL11Q9NVR0 708 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 IL36AQ9UHA7 158 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 NOCTQ9UK39 431 aaKnown RBP10.77□□□□□ -0.69
SHMT2-215ENST00000554656 FCF1Q9Y324 198 aaKnown RBP10.77□□□□□ -0.69
SHMT2-215ENST00000554656 FARP1Q9Y4F1 1045 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-215ENST00000554656 RAI2Q9Y5P3 530 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 LRP4O75096 1905 aa10.77□□□□□ -0.69
SHMT2-215ENST00000554656 CFAP46Q8IYW2 2715 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 FAM72CH0Y354 149 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 BRINP1O60477 761 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 SRGAP2O75044 1071 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 PCDH8O95206 1070 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 LSM8O95777 96 aaKnown RBP10.76□□□□□ -0.69
SHMT2-215ENST00000554656 GZMAP12544 262 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 ADRB3P13945 408 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 CHRNB2P17787 502 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 TNFAIP3P21580 790 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 ITGB7P26010 798 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 AKT2P31751 481 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 GKP32189 559 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 ABL2P42684 1182 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 ABCG1P45844 678 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 CCNHP51946 323 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-215ENST00000554656 TERF1P54274 439 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 ATP11AP98196 1134 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 GNA12Q03113 381 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 TUBB2AQ13885 445 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 C15orf59Q2T9L4 293 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-215ENST00000554656 ZNF542PQ5EBM4 170 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 CCDC122Q5T0U0 273 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 FAM72AQ5TYM5 149 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 FAM72DQ6L9T8 149 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 ALKBH5Q6P6C2 394 aaKnown RBP10.76□□□□□ -0.69
SHMT2-215ENST00000554656 LRRC31Q6UY01 552 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 ZNF783Q6ZMS7 281 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 PHLDB2Q86SQ0 1253 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 NLRP14Q86W24 1093 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 FAM72BQ86X60 149 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 PCDH20Q8N6Y1 951 aaKnown RBP10.76□□□□□ -0.69
SHMT2-215ENST00000554656 JOSD2Q8TAC2 188 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 SNIP1Q8TAD8 396 aaKnown RBP10.76□□□□□ -0.69
SHMT2-215ENST00000554656 UBE2Q2Q8WVN8 375 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 CCDC114Q96M63 670 aa10.76□□□□□ -0.69
SHMT2-215ENST00000554656 AGPAT1Q99943 283 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms