RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 Q6ZVU0 165 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 RYBPQ8N488 228 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-210ENST00000553950 NAT8LQ8N9F0 302 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 ARRDC2Q8TBH0 407 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 FRS2Q8WU20 508 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 SORCS1Q8WY21 1168 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 OR8D1Q8WZ84 308 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 ART4Q93070 314 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 TADA1Q96BN2 335 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 IFT43Q96FT9 208 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 MYO19Q96H55 970 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 FEM1CQ96JP0 617 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 EXOC2Q96KP1 924 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 ZNF641Q96N77 438 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-210ENST00000553950 FMO2Q99518 471 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 ADGRE3Q9BY15 652 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 CPEB1Q9BZB8 566 aaKnown RBP14.68□□□□□ -0.06
SHMT2-210ENST00000553950 TMEM245Q9H330 911 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 ANKZF1Q9H8Y5 726 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 RPL26L1Q9UNX3 145 aaKnown RBP14.68□□□□□ -0.06
SHMT2-210ENST00000553950 ESYT3A0FGR9 886 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 C1QTNF3-AMACRE9PGA6 284 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 K7ERQ8 282 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 SMAD6O43541 496 aaKnown RBP14.67□□□□□ -0.06
SHMT2-210ENST00000553950 SYNCRIPO60506 623 aaKnown RBP14.67□□□□□ -0.06
SHMT2-210ENST00000553950 PRNPP04156 253 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 FGF1P05230 155 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 NTSR1P30989 418 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 KIR2DL1P43626 348 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-210ENST00000553950 ARL4CP56559 192 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 STARD6P59095 220 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 MRPS25P82663 173 aaKnown RBP14.67□□□□□ -0.06
SHMT2-210ENST00000553950 SKOR1P84550 965 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 ELF2Q15723 593 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 DNAJC21Q5F1R6 531 aaKnown RBP14.67□□□□□ -0.06
SHMT2-210ENST00000553950 EOGTQ5NDL2 527 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 FAXCQ5TGI0 409 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 KCTD11Q693B1 232 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 NAIF1Q69YI7 327 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-210ENST00000553950 NCEH1Q6PIU2 408 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 PRUNE1Q86TP1 453 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 PDIK1LQ8N165 341 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 NDUFAF2Q8N183 169 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 ZCCHC9Q8N567 271 aaKnown RBP14.67□□□□□ -0.06
SHMT2-210ENST00000553950 PAF1Q8N7H5 531 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 IPMKQ8NFU5 416 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 IFT81Q8WYA0 676 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 PRCCQ92733 491 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-210ENST00000553950 PPP1R16AQ96I34 528 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 SRPK1Q96SB4 655 aaKnown RBP14.67□□□□□ -0.06
SHMT2-210ENST00000553950 RBM15Q96T37 977 aaKnown RBP eCLIP14.67□□□□□ -0.06
SHMT2-210ENST00000553950 TBL1YQ9BQ87 522 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 HEPHQ9BQS7 1158 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 IER2Q9BTL4 223 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 TDRD1Q9BXT4 1180 aaKnown RBP14.67□□□□□ -0.06
SHMT2-210ENST00000553950 ARGLU1Q9NWB6 273 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-210ENST00000553950 GRHL1Q9NZI5 618 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 HECAQ9UBI9 543 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-210ENST00000553950 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.67□□□□□ -0.06
SHMT2-210ENST00000553950 SLCO3A1Q9UIG8 710 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 CA14Q9ULX7 337 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 ACTL7AQ9Y615 435 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 STON1Q9Y6Q2 735 aa14.67□□□□□ -0.06
SHMT2-210ENST00000553950 V9GYY5 206 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-210ENST00000553950 TTC34A8MYJ7 566 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 K7EQS6 105 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 MUSKO15146 869 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 EIF3HO15372 352 aaKnown RBP eCLIP14.66□□□□□ -0.06
SHMT2-210ENST00000553950 RNASEH1O60930 286 aaKnown RBP14.66□□□□□ -0.06
SHMT2-210ENST00000553950 EGFP01133 1207 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 EPHX1P07099 455 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 IL12RB1P42701 662 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 MAGEA9P43362 315 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 GRIA4P48058 902 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 PLTPP55058 493 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 WNT3AP56704 352 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 MESP2Q0VG99 397 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 CDH17Q12864 832 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 LAMB3Q13751 1172 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 CCINQ13939 588 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 HIF1AQ16665 826 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 MYLK3Q32MK0 819 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 ATXN7L2Q5T6C5 722 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-210ENST00000553950 KDELC1Q6UW63 502 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 CENPUQ71F23 418 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 PDCD7Q8N8D1 485 aaKnown RBP14.66□□□□□ -0.06
SHMT2-210ENST00000553950 OR2A12Q8NGT7 310 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 HCAR2Q8TDS4 363 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 SPOCK2Q92563 424 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 LRRC39Q96DD0 335 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 OXNAD1Q96HP4 312 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-210ENST00000553950 GABRG3Q99928 467 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 OSBPL6Q9BZF3 934 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 TNKS2Q9H2K2 1166 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 ZDHHC6Q9H6R6 413 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 NOD2Q9HC29 1040 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 IL36AQ9UHA7 158 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 RAB21Q9UL25 225 aa14.66□□□□□ -0.06
SHMT2-210ENST00000553950 PRUNE2Q8WUY3 3088 aa14.65□□□□□ -0.06
SHMT2-210ENST00000553950 KANSL1LA0AUZ9 987 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms