RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 SHANK2Q9UPX8 1470 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 INPPL1O15357 1258 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 WEE2P0C1S8 567 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 AFF1P51825 1210 aaKnown RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 NDST2P52849 883 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 RRP1BQ14684 758 aaKnown RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 RFX4Q33E94 735 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 TOR2AQ5JU69 321 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 TIGD7Q6NT04 549 aaPredicted RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 LYPD8Q6UX82 237 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 EIF3MQ7L2H7 374 aaKnown RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 PDPRQ8NCN5 879 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 ADAMTS16Q8TE57 1224 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 THAP2Q9H0W7 228 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 PRDM5Q9NQX1 630 aaPredicted RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 MORF4L1Q9UBU8 362 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 PPIEQ9UNP9 301 aaKnown RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 CLIC3O95833 236 aa9.09□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF37AP17032 561 aaPredicted RBP9.09□□□□□ -0.96
GTF2A1-203ENST00000553612 ATP6V1B2P21281 511 aa9.09□□□□□ -0.96
GTF2A1-203ENST00000553612 CLINT1Q14677 625 aa9.09□□□□□ -0.96
GTF2A1-203ENST00000553612 CCNYQ8ND76 341 aa9.09□□□□□ -0.96
GTF2A1-203ENST00000553612 C1orf74Q96LT6 269 aa9.09□□□□□ -0.96
GTF2A1-203ENST00000553612 TTPALQ9BTX7 342 aa9.09□□□□□ -0.96
GTF2A1-203ENST00000553612 SDHAF3Q9NRP4 125 aa9.09□□□□□ -0.96
GTF2A1-203ENST00000553612 RAB23Q9ULC3 237 aa9.09□□□□□ -0.96
GTF2A1-203ENST00000553612 ANKRD6Q9Y2G4 727 aa9.09□□□□□ -0.96
GTF2A1-203ENST00000553612 NOS1P29475 1434 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 HMX3A6NHT5 357 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 OR6C65A6NJZ3 312 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 SNAP91O60641 907 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 TFAP2AP05549 437 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 CBLP22681 906 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 CASP3P42574 277 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 SP140Q13342 867 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 SLC27A3Q5K4L6 730 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 AGMOQ6ZNB7 445 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 LRTOMTQ8WZ04 291 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 BIN3Q9NQY0 253 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 THUMPD1Q9NXG2 353 aaKnown RBP9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 IPO11Q9UI26 975 aaKnown RBP9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 K7ENM7 598 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 POLRMTO00411 1230 aaKnown RBP9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 HMGN1P05114 100 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 GNAO1P09471 354 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 PVALBP20472 110 aaPredicted RBP9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 FNTBP49356 437 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF772Q68DY9 489 aaPredicted RBP9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 SLC16A13Q7RTY0 426 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 ILDR1Q86SU0 546 aaPredicted RBP9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 GPR180Q86V85 440 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 MPP5Q8N3R9 675 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF431Q8TF32 576 aaPredicted RBP9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 ST8SIA4Q92187 359 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 NELL1Q92832 810 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 PTERQ96BW5 349 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 QRSL1Q9H0R6 528 aaKnown RBP9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 SH3BP4Q9P0V3 963 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 AXIN2Q9Y2T1 843 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 SYNMO15061 1565 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 SSNA1O43805 119 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 SLC2A3P11169 496 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 PSMC2P35998 433 aaKnown RBP9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 COASYQ13057 564 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 PFKFB3Q16875 520 aaPredicted RBP9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 CLEC16AQ2KHT3 1053 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 CCDC36Q8IYA8 594 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 CCDC115Q96NT0 180 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 SLC6A17Q9H1V8 727 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 LRRC4CQ9HCJ2 640 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 PIH1D1Q9NWS0 290 aaKnown RBP9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 DLGAP4Q9Y2H0 992 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 MFHAS1Q9Y4C4 1052 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 PCDHGB3Q9Y5G1 929 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 ACTL7AQ9Y615 435 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 EYA4O95677 639 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 TXNDC12O95881 172 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 MT-ND1P03886 318 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 M6PRP20645 277 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 CD40LGP29965 261 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 ATP12AP54707 1039 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 SEC23AQ15436 765 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 CYP4Z2PQ8N1L4 340 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 PLD6Q8N2A8 252 aaKnown RBP9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 FAM156AQ8NDB6 213 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 CMTM3Q96MX0 182 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 C11orf70Q9BRQ4 267 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 TEX13CA0A0J9YWL9 993 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 NUDT19A8MXV4 375 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 G3V2T6 193 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 K7ERI5 159 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 MAGEC1O60732 1142 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 SNX4O95219 450 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 SERPINA3P01011 423 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 IFNA7P01567 189 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 CDK1P06493 297 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 KCNA6P17658 529 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 IL13P35225 146 aa9.08□□□□□ -0.96
GTF2A1-203ENST00000553612 NNMTP40261 264 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms