RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 TTC7BQ86TV6 843 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 BBS5Q8N3I7 341 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 OR6K2Q8NGY2 324 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 RFFLQ8WZ73 363 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 TSC1Q92574 1164 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 ZNF641Q96N77 438 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-204ENST00000553324 SLC6A18Q96N87 628 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 KLHL32Q96NJ5 620 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 PANX2Q96RD6 677 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 TUBGCP5Q96RT8 1024 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 ZNF670Q9BS34 389 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 CINPQ9BW66 212 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-204ENST00000553324 FADS3Q9Y5Q0 445 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 SNX11Q9Y5W9 270 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 NUMA1Q14980 2115 aa15.55■□□□□ 0.08
SHMT2-204ENST00000553324 TLR4O00206 839 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 NEMP1O14524 444 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 IL4RP24394 825 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 AKT2P31751 481 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 GKP32189 559 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 HSPA9P38646 679 aaKnown RBP15.54■□□□□ 0.08
SHMT2-204ENST00000553324 CTSKP43235 329 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 MAGEA1P43355 309 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 BNC1Q01954 994 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 ZFYVE27Q5T4F4 411 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 PSAPL1Q6NUJ1 521 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 PARS2Q7L3T8 475 aaKnown RBP15.54■□□□□ 0.08
SHMT2-204ENST00000553324 PIP4P1Q86T03 277 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 TMTC1Q8IUR5 882 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 OXR1Q8N573 874 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 NPWQ8N729 165 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 CALN1Q9BXU9 219 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 SUV39H2Q9H5I1 410 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 GDF3Q9NR23 364 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 TM7SF3Q9NS93 570 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 LHX3Q9UBR4 397 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 SEPT3Q9UH03 358 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 SLCO1B1Q9Y6L6 691 aa15.54■□□□□ 0.08
SHMT2-204ENST00000553324 A0A1W2PR77 199 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 RNF103O00237 685 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 SLC31A1O15431 190 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 YKT6O15498 198 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 IPO7O95373 1038 aaKnown RBP15.53■□□□□ 0.08
SHMT2-204ENST00000553324 LCA5LO95447 670 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 CD59P13987 128 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 KCNA4P22459 653 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 HNRNPA2B1P22626 353 aaKnown RBP15.53■□□□□ 0.08
SHMT2-204ENST00000553324 XPAP23025 273 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-204ENST00000553324 ARSEP51690 589 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 SGCGQ13326 291 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 DPYSL3Q14195 570 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 LBRQ14739 615 aaKnown RBP15.53■□□□□ 0.08
SHMT2-204ENST00000553324 ZNF423Q2M1K9 1284 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 ZNF284Q2VY69 593 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 ODF2Q5BJF6 829 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 CFAP58Q5T655 872 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 LRRC38Q5VT99 294 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 BRAT1Q6PJG6 821 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 DBX2Q6ZNG2 339 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 GAS2L3Q86XJ1 694 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 VSIG1Q86XK7 387 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 ATPAF2Q8N5M1 289 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 OR2I1PQ8NGU4 316 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 ASB12Q8WXK4 309 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 CALR3Q96L12 384 aaKnown RBP15.53■□□□□ 0.08
SHMT2-204ENST00000553324 PSKH2Q96QS6 385 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 SLC17A9Q9BYT1 436 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 ATP13A3Q9H7F0 1226 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 ERVMER34-1Q9H9K5 563 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 HAUS2Q9NVX0 235 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 PCDHB9Q9Y5E1 797 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 HS3ST3A1Q9Y663 406 aa15.53■□□□□ 0.08
SHMT2-204ENST00000553324 A0A1W2PQ67 120 aa15.52■□□□□ 0.08
SHMT2-204ENST00000553324 TMEM110-MUSTN1A8MSY1 372 aa15.52■□□□□ 0.08
SHMT2-204ENST00000553324 ADRB1P08588 477 aa15.52■□□□□ 0.08
SHMT2-204ENST00000553324 MX2P20592 715 aa15.52■□□□□ 0.08
SHMT2-204ENST00000553324 NOP2P46087 812 aaKnown RBP15.52■□□□□ 0.08
SHMT2-204ENST00000553324 POLR2LP62875 67 aaKnown RBP15.52■□□□□ 0.08
SHMT2-204ENST00000553324 ELP6Q0PNE2 266 aa15.52■□□□□ 0.08
SHMT2-204ENST00000553324 ATP13A4Q4VNC1 1196 aa15.52■□□□□ 0.08
SHMT2-204ENST00000553324 TMEM259Q4ZIN3 620 aa15.52■□□□□ 0.08
SHMT2-204ENST00000553324 ANKRD20A8PQ5CZ79 823 aa15.52■□□□□ 0.08
SHMT2-204ENST00000553324 SRLQ86TD4 932 aa15.52■□□□□ 0.08
SHMT2-204ENST00000553324 DCP2Q8IU60 420 aaKnown RBP15.52■□□□□ 0.08
SHMT2-204ENST00000553324 TSEN2Q8NCE0 465 aaKnown RBP15.52■□□□□ 0.08
SHMT2-204ENST00000553324 DEFB124Q8NES8 71 aa15.52■□□□□ 0.08
SHMT2-204ENST00000553324 KLHDC7BQ96G42 594 aa15.52■□□□□ 0.08
SHMT2-204ENST00000553324 LENG8Q96PV6 779 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-204ENST00000553324 ELF4Q99607 663 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-204ENST00000553324 MAK16Q9BXY0 300 aaKnown RBP15.52■□□□□ 0.08
SHMT2-204ENST00000553324 ETNK2Q9NVF9 386 aa15.52■□□□□ 0.08
SHMT2-204ENST00000553324 CHD5Q8TDI0 1954 aa15.52■□□□□ 0.07
SHMT2-204ENST00000553324 CACNA1EQ15878 2313 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-204ENST00000553324 MED19A0JLT2 244 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-204ENST00000553324 ZNF487B1APH4 448 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 FLRT2O43155 660 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 PCDHGA12O60330 932 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 MAFKO60675 156 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 PAK4O96013 591 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms