RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 TTC7BQ86TV6 843 aa16.12■□□□□ 0.17
CDK4-215ENST00000553237 CPLX3Q8WVH0 158 aa16.12■□□□□ 0.17
CDK4-215ENST00000553237 EXOC2Q96KP1 924 aa16.12■□□□□ 0.17
CDK4-215ENST00000553237 BMFQ96LC9 184 aa16.12■□□□□ 0.17
CDK4-215ENST00000553237 GDAP1L1Q96MZ0 367 aa16.12■□□□□ 0.17
CDK4-215ENST00000553237 KCTD15Q96SI1 283 aaPredicted RBP16.12■□□□□ 0.17
CDK4-215ENST00000553237 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.12■□□□□ 0.17
CDK4-215ENST00000553237 KLHL11Q9NVR0 708 aa16.12■□□□□ 0.17
CDK4-215ENST00000553237 IFNKQ9P0W0 207 aa16.12■□□□□ 0.17
CDK4-215ENST00000553237 CHD5Q8TDI0 1954 aa16.12■□□□□ 0.17
CDK4-215ENST00000553237 POM121BA6NF01 834 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 SRRM3A6NNA2 597 aaPredicted RBP16.11■□□□□ 0.17
CDK4-215ENST00000553237 J3KR12 359 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 INSIG1O15503 277 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 DAPK3O43293 454 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 TSPAN6O43657 245 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 PRPSAP2O60256 369 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 IGSF6O95976 241 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 ITIH2P19823 946 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 PBX1P40424 430 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 SGCGQ13326 291 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 INO80DQ53TQ3 878 aaPredicted RBP16.11■□□□□ 0.17
CDK4-215ENST00000553237 TDRD12Q587J7 1177 aaKnown RBP16.11■□□□□ 0.17
CDK4-215ENST00000553237 ZNF542PQ5EBM4 170 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 PPP6R3Q5H9R7 873 aaPredicted RBP16.11■□□□□ 0.17
CDK4-215ENST00000553237 FIGNQ5HY92 759 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 PTAR1Q7Z6K3 402 aaPredicted RBP16.11■□□□□ 0.17
CDK4-215ENST00000553237 ABI3BPQ7Z7G0 1075 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 RNF214Q8ND24 703 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 CASKIN2Q8WXE0 1202 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 RAB7BQ96AH8 199 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 OSBPL1AQ9BXW6 950 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 SLC39A8Q9C0K1 460 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 LRRC19Q9H756 370 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 UCKL1Q9NWZ5 548 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 LHX3Q9UBR4 397 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 UBA2Q9UBT2 640 aaPredicted RBP16.11■□□□□ 0.17
CDK4-215ENST00000553237 HS3ST3A1Q9Y663 406 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 TRPM6Q9BX84 2022 aa16.11■□□□□ 0.17
CDK4-215ENST00000553237 ASPMQ8IZT6 3477 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 PLXNB3Q9ULL4 1909 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 A6NNZ2 444 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 TAF4O00268 1085 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 SPINT1O43278 529 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 HTR7P34969 479 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 PAPOLAP51003 745 aaKnown RBP16.1■□□□□ 0.17
CDK4-215ENST00000553237 NDST2P52849 883 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 CLDN6P56747 220 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 SMAD1Q15797 465 aaKnown RBP16.1■□□□□ 0.17
CDK4-215ENST00000553237 HGSNATQ68CP4 663 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 KDM7AQ6ZMT4 941 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 RFX8Q6ZV50 586 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 CYP4V2Q6ZWL3 525 aaPredicted RBP16.1■□□□□ 0.17
CDK4-215ENST00000553237 SLC22A18ASQ8N1D0 253 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 GALNT15Q8N3T1 639 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 SLC25A45Q8N413 288 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 FNIP1Q8TF40 1166 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 C1QTNF2Q9BXJ5 285 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 ISCUQ9H1K1 167 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 DONSONQ9NYP3 566 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 SCINQ9Y6U3 715 aa16.1■□□□□ 0.17
CDK4-215ENST00000553237 GOLGA4Q13439 2230 aaKnown RBP16.1■□□□□ 0.17
CDK4-215ENST00000553237 ARHGAP42A6NI28 874 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 TRIM38O00635 465 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 FFAR2O15552 330 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 MMP20O60882 483 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 LRCH4O75427 683 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 PIGNO95427 931 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 CAPNS1P04632 268 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 MYBL1P10243 752 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 TIMP2P16035 220 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 ERCC2P18074 760 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 DGKAP23743 735 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 ACADVLP49748 655 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 MDM1Q8TC05 714 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 TSC1Q92574 1164 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 TRIM11Q96F44 468 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 KLF6Q99612 283 aaPredicted RBP16.09■□□□□ 0.17
CDK4-215ENST00000553237 NCAPGQ9BPX3 1015 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 PDFQ9HBH1 243 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 MRPL47Q9HD33 250 aaKnown RBP16.09■□□□□ 0.17
CDK4-215ENST00000553237 DNAJC28Q9NX36 388 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 MFHAS1Q9Y4C4 1052 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 PCDHGA1Q9Y5H4 931 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 PTPRBP23467 1997 aa16.09■□□□□ 0.17
CDK4-215ENST00000553237 A0A1W2PQJ5 194 aa16.08■□□□□ 0.16
CDK4-215ENST00000553237 EIF3CLB5ME19 914 aaKnown RBP16.08■□□□□ 0.16
CDK4-215ENST00000553237 DFFAO00273 331 aa16.08■□□□□ 0.16
CDK4-215ENST00000553237 FPGTO14772 594 aa16.08■□□□□ 0.16
CDK4-215ENST00000553237 AREL1O15033 823 aa16.08■□□□□ 0.16
CDK4-215ENST00000553237 SIGLEC6O43699 453 aa16.08■□□□□ 0.16
CDK4-215ENST00000553237 PRAMEF11O60813 436 aa16.08■□□□□ 0.16
CDK4-215ENST00000553237 RFPL3O75679 317 aa16.08■□□□□ 0.16
CDK4-215ENST00000553237 XPAP23025 273 aaPredicted RBP16.08■□□□□ 0.16
CDK4-215ENST00000553237 SMTNL2Q2TAL5 461 aa16.08■□□□□ 0.16
CDK4-215ENST00000553237 KYAT3Q6YP21 454 aaKnown RBP16.08■□□□□ 0.16
CDK4-215ENST00000553237 ARHGAP36Q6ZRI8 547 aa16.08■□□□□ 0.16
CDK4-215ENST00000553237 FAM174AQ8TBP5 190 aa16.08■□□□□ 0.16
CDK4-215ENST00000553237 ARHGEF26Q96DR7 871 aa16.08■□□□□ 0.16
CDK4-215ENST00000553237 BTBD6Q96KE9 485 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms