RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 UGT2B4P06133 528 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 FAM228BP0C875 321 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 GIMD1P0DJR0 217 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 UBASH3AP57075 661 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 GEMIN4P57678 1058 aaKnown RBP13.22□□□□□ -0.29
NPAS3-209ENST00000551008 TPI1P60174 286 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 DPYSQ14117 519 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 PARP15Q460N3 678 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 ZNF805Q5CZA5 627 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 PPP1R2P3Q6NXS1 205 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 ARHGAP36Q6ZRI8 547 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 CPNE8Q86YQ8 564 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 SYN2Q92777 582 aaPredicted RBP13.22□□□□□ -0.29
NPAS3-209ENST00000551008 ARHGEF26Q96DR7 871 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 PPP1R16AQ96I34 528 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 CELF6Q96J87 481 aaKnown RBP13.22□□□□□ -0.29
NPAS3-209ENST00000551008 EXOC2Q96KP1 924 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 DYRK4Q9NR20 520 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 MYO1AQ9UBC5 1043 aa13.22□□□□□ -0.29
NPAS3-209ENST00000551008 DSPP15924 2871 aaKnown RBP13.21□□□□□ -0.29
NPAS3-209ENST00000551008 ZSCAN5CA6NGD5 496 aaPredicted RBP13.21□□□□□ -0.29
NPAS3-209ENST00000551008 EEF2KO00418 725 aaKnown RBP13.21□□□□□ -0.29
NPAS3-209ENST00000551008 TNFSF14O43557 240 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 PRAMEF11O60813 436 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 SDC3O75056 442 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 PCDH8O95206 1070 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 ERCC2P18074 760 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 HNRNPA2B1P22626 353 aaKnown RBP13.21□□□□□ -0.29
NPAS3-209ENST00000551008 HTR7P34969 479 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 CLDN6P56747 220 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 SNRPD1P62314 119 aaKnown RBP13.21□□□□□ -0.29
NPAS3-209ENST00000551008 ZBED6P86452 979 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 OVGP1Q12889 678 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 SUZ12Q15022 739 aaKnown RBP13.21□□□□□ -0.29
NPAS3-209ENST00000551008 INO80DQ53TQ3 878 aaPredicted RBP13.21□□□□□ -0.29
NPAS3-209ENST00000551008 TDRD12Q587J7 1177 aaKnown RBP13.21□□□□□ -0.29
NPAS3-209ENST00000551008 ERMARDQ5T6L9 678 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 CCNI2Q6ZMN8 369 aaPredicted RBP13.21□□□□□ -0.29
NPAS3-209ENST00000551008 RFX8Q6ZV50 586 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 ZSWIM9Q86XI8 627 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 SLC25A45Q8N413 288 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 TSC1Q92574 1164 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 LRIG1Q96JA1 1093 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 BTBD6Q96KE9 485 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 GDAP1L1Q96MZ0 367 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 KLHL32Q96NJ5 620 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 C1QTNF2Q9BXJ5 285 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 XPO4Q9C0E2 1151 aaKnown RBP13.21□□□□□ -0.29
NPAS3-209ENST00000551008 THAP2Q9H0W7 228 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 CATSPERBQ9H7T0 1116 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 ETNK2Q9NVF9 386 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 UCKL1Q9NWZ5 548 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 CWC15Q9P013 229 aaKnown RBP13.21□□□□□ -0.29
NPAS3-209ENST00000551008 HPCAL4Q9UM19 191 aa13.21□□□□□ -0.29
NPAS3-209ENST00000551008 APOBEC2Q9Y235 224 aaKnown RBP13.21□□□□□ -0.29
NPAS3-209ENST00000551008 RP1P56715 2156 aa13.21□□□□□ -0.3
NPAS3-209ENST00000551008 TSPAN11A1L157 253 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 IGLON5A6NGN9 336 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 GOLGA8CPA6NN73 597 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 TAF4O00268 1085 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 TRIM38O00635 465 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 MUSKO15146 869 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 BUB1BO60566 1050 aaPredicted RBP13.2□□□□□ -0.3
NPAS3-209ENST00000551008 PIGNO95427 931 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 POP4O95707 220 aaKnown RBP13.2□□□□□ -0.3
NPAS3-209ENST00000551008 PAK4O96013 591 aaPredicted RBP13.2□□□□□ -0.3
NPAS3-209ENST00000551008 SERPING1P05155 500 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 THEGLP0DJG4 465 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 MYBL1P10243 752 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 TIMP2P16035 220 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 ACADVLP49748 655 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 PAPOLAP51003 745 aaKnown RBP13.2□□□□□ -0.3
NPAS3-209ENST00000551008 NDST2P52849 883 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 RPS21P63220 83 aaKnown RBP13.2□□□□□ -0.3
NPAS3-209ENST00000551008 SLC25A11Q02978 314 aaKnown RBP13.2□□□□□ -0.3
NPAS3-209ENST00000551008 DNAJC3Q13217 504 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 STAT4Q14765 748 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 SLC45A4Q5BKX6 768 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 KIAA1161Q6NSJ0 714 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 FBXL19Q6PCT2 694 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 GDPD4Q6W3E5 623 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 KYAT3Q6YP21 454 aaKnown RBP13.2□□□□□ -0.3
NPAS3-209ENST00000551008 TMPRSS7Q7RTY8 843 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 RYBPQ8N488 228 aaPredicted RBP13.2□□□□□ -0.3
NPAS3-209ENST00000551008 EID2Q8N6I1 236 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 CPLX3Q8WVH0 158 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 CASKIN2Q8WXE0 1202 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 SKA1Q96BD8 255 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 KLHDC7BQ96G42 594 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 SLC17A9Q9BYT1 436 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 FTSJ1Q9UET6 329 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 ZMIZ1Q9ULJ6 1067 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 PNMA8BQ9ULN7 279 aaPredicted RBP13.2□□□□□ -0.3
NPAS3-209ENST00000551008 SCINQ9Y6U3 715 aa13.2□□□□□ -0.3
NPAS3-209ENST00000551008 EIF3CLB5ME19 914 aaKnown RBP13.19□□□□□ -0.3
NPAS3-209ENST00000551008 ENC1O14682 589 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 YKT6O15498 198 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 PRPSAP2O60256 369 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 IGSF6O95976 241 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 PEX11BO96011 259 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms