RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 RYBPQ8N488 228 aaPredicted RBP22.03■■□□□ 1.12
SMARCC2-210ENST00000550519 JOSD2Q8TAC2 188 aa22.03■■□□□ 1.12
SMARCC2-210ENST00000550519 GPT2Q8TD30 523 aa22.03■■□□□ 1.12
SMARCC2-210ENST00000550519 POLR1BQ9H9Y6 1135 aa22.03■■□□□ 1.12
SMARCC2-210ENST00000550519 NCKIPSDQ9NZQ3 722 aa22.03■■□□□ 1.12
SMARCC2-210ENST00000550519 SALL4Q9UJQ4 1053 aa22.03■■□□□ 1.12
SMARCC2-210ENST00000550519 HPCAL4Q9UM19 191 aa22.03■■□□□ 1.12
SMARCC2-210ENST00000550519 SHROOM3Q8TF72 1996 aa22.03■■□□□ 1.12
SMARCC2-210ENST00000550519 KRIT1O00522 736 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 NEMP1O14524 444 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 RIOK3O14730 519 aaKnown RBP22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 TPP1O14773 563 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 AREL1O15033 823 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 GFPT2O94808 682 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 JUNDP17535 347 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 PCBP4P57723 403 aaKnown RBP22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 MYLK3Q32MK0 819 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 CT47A1Q5JQC4 288 aaPredicted RBP22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 PHLDB2Q86SQ0 1253 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 SLC30A5Q8TAD4 765 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 MAPK15Q8TD08 544 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 CENPTQ96BT3 561 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 TBC1D31Q96DN5 1066 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 ARHGEF26Q96DR7 871 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 LGMNQ99538 433 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 OSBPL1AQ9BXW6 950 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 TAB2Q9NYJ8 693 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 MGAQ8IWI9 3026 aa22.02■■□□□ 1.12
SMARCC2-210ENST00000550519 EME2A4GXA9 379 aaPredicted RBP22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 RAMP2O60895 175 aa22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 UGT2B4P06133 528 aa22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 PLEKP08567 350 aaPredicted RBP22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 TGM2P21980 687 aa22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 HDAC4P56524 1084 aa22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 ERVPABLB-1P60509 514 aa22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 PTP4A2Q12974 167 aa22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 CDKN3Q16667 212 aa22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 ISXQ2M1V0 245 aa22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 GUSBP11Q6P575 273 aa22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 LEKR1Q6ZMV7 388 aa22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 CCDC185Q8N715 623 aa22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 LMX1AQ8TE12 382 aa22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 KLHL32Q96NJ5 620 aa22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 C11orf70Q9BRQ4 267 aa22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 CHD5Q8TDI0 1954 aa22.01■■□□□ 1.11
SMARCC2-210ENST00000550519 CFAP46Q8IYW2 2715 aa22■■□□□ 1.11
SMARCC2-210ENST00000550519 KDELR3O43731 214 aa22■■□□□ 1.11
SMARCC2-210ENST00000550519 GJB6O95452 261 aa22■■□□□ 1.11
SMARCC2-210ENST00000550519 UNGP13051 313 aaPredicted RBP22■■□□□ 1.11
SMARCC2-210ENST00000550519 SOX5P35711 763 aa22■■□□□ 1.11
SMARCC2-210ENST00000550519 GSCP56915 257 aaPredicted RBP22■■□□□ 1.11
SMARCC2-210ENST00000550519 JAM2P57087 298 aa22■■□□□ 1.11
SMARCC2-210ENST00000550519 CXADRP78310 365 aa22■■□□□ 1.11
SMARCC2-210ENST00000550519 DEFB133Q30KQ1 61 aa22■■□□□ 1.11
SMARCC2-210ENST00000550519 ATXN7L2Q5T6C5 722 aaPredicted RBP22■■□□□ 1.11
SMARCC2-210ENST00000550519 TRIM72Q6ZMU5 477 aa22■■□□□ 1.11
SMARCC2-210ENST00000550519 FAM172AQ8WUF8 416 aa22■■□□□ 1.11
SMARCC2-210ENST00000550519 BTN2A2Q8WVV5 523 aa22■■□□□ 1.11
SMARCC2-210ENST00000550519 NTAN1Q96AB6 310 aa22■■□□□ 1.11
SMARCC2-210ENST00000550519 NAF1Q96HR8 494 aaKnown RBP22■■□□□ 1.11
SMARCC2-210ENST00000550519 IL12RB2Q99665 862 aa22■■□□□ 1.11
SMARCC2-210ENST00000550519 ASCL3Q9NQ33 180 aa22■■□□□ 1.11
SMARCC2-210ENST00000550519 CPED1A4D0V7 1026 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 ZSCAN5CA6NGD5 496 aaPredicted RBP21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 KRT3P12035 628 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 IGFALSP35858 605 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 KLK7P49862 253 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 POLR2FP61218 127 aaKnown RBP21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 PTK2BQ14289 1009 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 IGF2-ASQ6U949 168 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 PCSK4Q6UW60 755 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 GDPD4Q6W3E5 623 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 EFL1Q7Z2Z2 1120 aaKnown RBP21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 TTC7BQ86TV6 843 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 RBFAQ8N0V3 343 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 GRAMD1AQ96CP6 724 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 TBATAQ96M53 351 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 PCDHB18PQ96TA0 734 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 BOCQ9BWV1 1114 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 TTYH3Q9C0H2 523 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 NUP62CLQ9H1M0 184 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 TCEAL2Q9H3H9 227 aaPredicted RBP21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 NOL6Q9H6R4 1146 aaKnown RBP21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 SPASTQ9UBP0 616 aa21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 PNMA8BQ9ULN7 279 aaPredicted RBP21.99■■□□□ 1.11
SMARCC2-210ENST00000550519 A0A1W2PNU3 283 aaPredicted RBP21.98■■□□□ 1.11
SMARCC2-210ENST00000550519 EPHB6O15197 1021 aa21.98■■□□□ 1.11
SMARCC2-210ENST00000550519 GCATO75600 419 aa21.98■■□□□ 1.11
SMARCC2-210ENST00000550519 TMCC1O94876 653 aa21.98■■□□□ 1.11
SMARCC2-210ENST00000550519 RFC1P35251 1148 aaPredicted RBP21.98■■□□□ 1.11
SMARCC2-210ENST00000550519 YPEL5P62699 121 aa21.98■■□□□ 1.11
SMARCC2-210ENST00000550519 TPCN2Q8NHX9 752 aa21.98■■□□□ 1.11
SMARCC2-210ENST00000550519 ENOX1Q8TC92 643 aaKnown RBP21.98■■□□□ 1.11
SMARCC2-210ENST00000550519 CASKIN2Q8WXE0 1202 aa21.98■■□□□ 1.11
SMARCC2-210ENST00000550519 GDAP1L1Q96MZ0 367 aa21.98■■□□□ 1.11
SMARCC2-210ENST00000550519 VPS16Q9H269 839 aa21.98■■□□□ 1.11
SMARCC2-210ENST00000550519 FAM207AQ9NSI2 230 aaPredicted RBP21.98■■□□□ 1.11
SMARCC2-210ENST00000550519 CHMP5Q9NZZ3 219 aa21.98■■□□□ 1.11
SMARCC2-210ENST00000550519 APOBEC3BQ9UH17 382 aaKnown RBP21.98■■□□□ 1.11
SMARCC2-210ENST00000550519 MFHAS1Q9Y4C4 1052 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms