RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 GALK1P51570 392 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 ZP2Q05996 745 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 CDH17Q12864 832 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 CARD16Q5EG05 197 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 DGKKQ5KSL6 1271 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 SPDYCQ5MJ68 293 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 GSPT2Q8IYD1 628 aaKnown RBP17.6■□□□□ 0.41
LETMD1-220ENST00000549686 IPMKQ8NFU5 416 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 CYB5D2Q8WUJ1 264 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 ANKRD7Q92527 254 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 IFT43Q96FT9 208 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 LRIG1Q96JA1 1093 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 MRGPRX2Q96LB1 330 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 ARNT2Q9HBZ2 717 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 CASS4Q9NQ75 786 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 SLCO3A1Q9UIG8 710 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 DUSP12Q9UNI6 340 aa17.6■□□□□ 0.41
LETMD1-220ENST00000549686 SHROOM3Q8TF72 1996 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 COL4A3Q01955 1670 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 LOC285095A0A1B0GVY8 99 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 WASH3PC4AMC7 463 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 GOLGA8MH3BSY2 632 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 MAN2B1O00754 1011 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 POP4O95707 220 aaKnown RBP17.59■□□□□ 0.41
LETMD1-220ENST00000549686 HNRNPLP14866 589 aaKnown RBP eCLIP17.59■□□□□ 0.41
LETMD1-220ENST00000549686 HLA-DPA1P20036 260 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 RGRP47804 291 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 SOX9P48436 509 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 NPY2RP49146 381 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 RPL26P61254 145 aaKnown RBP17.59■□□□□ 0.41
LETMD1-220ENST00000549686 CDK18Q07002 472 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 GRSF1Q12849 480 aaKnown RBP eCLIP17.59■□□□□ 0.41
LETMD1-220ENST00000549686 MYLK3Q32MK0 819 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 FNDC3BQ53EP0 1204 aaKnown RBP17.59■□□□□ 0.41
LETMD1-220ENST00000549686 FAM182AQ5T1J6 154 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 RANBP10Q6VN20 620 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 TRMT10CQ7L0Y3 403 aaKnown RBP17.59■□□□□ 0.41
LETMD1-220ENST00000549686 TMC3Q7Z5M5 1100 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 CAND1Q86VP6 1230 aaKnown RBP17.59■□□□□ 0.41
LETMD1-220ENST00000549686 MREGQ8N565 214 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.59■□□□□ 0.41
LETMD1-220ENST00000549686 DNAAF3Q8N9W5 541 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 FRS2Q8WU20 508 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 ATXN2LQ8WWM7 1075 aaKnown RBP17.59■□□□□ 0.41
LETMD1-220ENST00000549686 MYO19Q96H55 970 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 EXOC2Q96KP1 924 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 FICDQ9BVA6 458 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 CPEB1Q9BZB8 566 aaKnown RBP17.59■□□□□ 0.41
LETMD1-220ENST00000549686 TM6SF2Q9BZW4 377 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 ATP13A3Q9H7F0 1226 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 UBP1Q9NZI7 540 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 BFARQ9NZS9 450 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 THAP10Q9P2Z0 257 aaPredicted RBP17.59■□□□□ 0.41
LETMD1-220ENST00000549686 HECAQ9UBI9 543 aaPredicted RBP17.59■□□□□ 0.41
LETMD1-220ENST00000549686 SUN2Q9UH99 717 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 RPL26L1Q9UNX3 145 aaKnown RBP17.59■□□□□ 0.41
LETMD1-220ENST00000549686 MYOFQ9NZM1 2061 aa17.59■□□□□ 0.41
LETMD1-220ENST00000549686 EDDM13A0A1B0GTR0 161 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 ALOX15BO15296 676 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 NDST3O95803 873 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 FAM153BP0C7A2 387 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 BCL2L1Q07817 233 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 DHX9Q08211 1270 aaKnown RBP17.58■□□□□ 0.4
LETMD1-220ENST00000549686 MESP2Q0VG99 397 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 ZNF234Q14588 700 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 HNRNPA1L2Q32P51 320 aaKnown RBP17.58■□□□□ 0.4
LETMD1-220ENST00000549686 FAM153CQ494X1 144 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 TMEM196Q5HYL7 178 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 BEND6Q5SZJ8 279 aaPredicted RBP17.58■□□□□ 0.4
LETMD1-220ENST00000549686 ATXN7L2Q5T6C5 722 aaPredicted RBP17.58■□□□□ 0.4
LETMD1-220ENST00000549686 FBXO38Q6PIJ6 1188 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 ZNF534Q76KX8 674 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 CCDC25Q86WR0 208 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 CCNJLQ8IV13 435 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 RYBPQ8N488 228 aaPredicted RBP17.58■□□□□ 0.4
LETMD1-220ENST00000549686 SORCS1Q8WY21 1168 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 ZNF641Q96N77 438 aaPredicted RBP17.58■□□□□ 0.4
LETMD1-220ENST00000549686 TTC25Q96NG3 672 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 NAT9Q9BTE0 207 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 TDRD1Q9BXT4 1180 aaKnown RBP17.58■□□□□ 0.4
LETMD1-220ENST00000549686 ADGRE3Q9BY15 652 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 IL22Q9GZX6 179 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 TNKS2Q9H2K2 1166 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 PRDM6Q9NQX0 595 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 HEBP1Q9NRV9 189 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 SORCS3Q9UPU3 1222 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 RAI2Q9Y5P3 530 aa17.58■□□□□ 0.4
LETMD1-220ENST00000549686 MAGEB16A2A368 324 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 C19orf67A6NJJ6 358 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 SDR42E2A6NKP2 422 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 FGF1P05230 155 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 TSHRP16473 764 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 SERPINA4P29622 427 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 CCNHP51946 323 aaPredicted RBP17.57■□□□□ 0.4
LETMD1-220ENST00000549686 PMS2P54278 862 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 PDIA2Q13087 525 aaKnown RBP17.57■□□□□ 0.4
LETMD1-220ENST00000549686 LAMB3Q13751 1172 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 SPARCL1Q14515 664 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 PCSK7Q16549 785 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 FBXO43Q4G163 708 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms