RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 POLR2FP61218 127 aaKnown RBP12.43□□□□□ -0.42
DDX54-206ENST00000549271 CYP4F2P78329 520 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 SLC6A3Q01959 620 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 CENPCQ03188 943 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 EIF3IQ13347 325 aaKnown RBP12.43□□□□□ -0.42
DDX54-206ENST00000549271 FZD2Q14332 565 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 ACBD5Q5T8D3 534 aaPredicted RBP12.43□□□□□ -0.42
DDX54-206ENST00000549271 TAF3Q5VWG9 929 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 NEK5Q6P3R8 708 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 PTRH1Q86Y79 214 aaKnown RBP12.43□□□□□ -0.42
DDX54-206ENST00000549271 DCP2Q8IU60 420 aaKnown RBP12.43□□□□□ -0.42
DDX54-206ENST00000549271 ZDHHC17Q8IUH5 632 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 KLK6Q92876 244 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 NT5C3BQ969T7 300 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 PGAP3Q96FM1 320 aaPredicted RBP12.43□□□□□ -0.42
DDX54-206ENST00000549271 BOCQ9BWV1 1114 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 FAM207AQ9NSI2 230 aaPredicted RBP12.43□□□□□ -0.42
DDX54-206ENST00000549271 VANGL2Q9ULK5 521 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 ABCA12Q86UK0 2595 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 FBN2P35556 2912 aa12.43□□□□□ -0.42
DDX54-206ENST00000549271 LGALS16A8MUM7 142 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 NTN3O00634 580 aaPredicted RBP12.42□□□□□ -0.42
DDX54-206ENST00000549271 TPP1O14773 563 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 NVLO15381 856 aaKnown RBP12.42□□□□□ -0.42
DDX54-206ENST00000549271 PAGE1O75459 146 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 GFPT2O94808 682 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 MMEP08473 750 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 ATP1A3P13637 1013 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 CHRNB2P17787 502 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 CXCR3P49682 368 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 IRAK1P51617 712 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 C1QBPQ07021 282 aaKnown RBP12.42□□□□□ -0.42
DDX54-206ENST00000549271 CCDC15Q0P6D6 951 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 SYCP1Q15431 976 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 NR0B2Q15466 257 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 ACCSLQ4AC99 568 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 ANO6Q4KMQ2 910 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 BRMS1LQ5PSV4 323 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 MANEAQ5SRI9 462 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 FKBP15Q5T1M5 1219 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 PIP5KL1Q5T9C9 394 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 OTUD1Q5VV17 481 aaPredicted RBP12.42□□□□□ -0.42
DDX54-206ENST00000549271 CAVIN1Q6NZI2 390 aaKnown RBP12.42□□□□□ -0.42
DDX54-206ENST00000549271 Q6ZSR6 202 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 Q6ZVU0 165 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 B3GNT8Q7Z7M8 397 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 HORMAD1Q86X24 394 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 JAMLQ86YT9 394 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 ZNF683Q8IZ20 524 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 FBXO39Q8N4B4 442 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 AOPEPQ8N6M6 819 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 ZSCAN1Q8NBB4 408 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 TMEM35BQ8NCS4 154 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 TMIEQ8NEW7 156 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 FAM174AQ8TBP5 190 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 EPS8L1Q8TE68 723 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 SLC20A1Q8WUM9 679 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 C1orf74Q96LT6 269 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 NPY6RQ99463 290 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 C2orf49Q9BVC5 232 aaPredicted RBP12.42□□□□□ -0.42
DDX54-206ENST00000549271 LRRC4CQ9HCJ2 640 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 NLRC4Q9NPP4 1024 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 ARHGEF38Q9NXL2 777 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 KLF15Q9UIH9 416 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 NOCTQ9UK39 431 aaKnown RBP12.42□□□□□ -0.42
DDX54-206ENST00000549271 VPS28Q9UK41 221 aa12.42□□□□□ -0.42
DDX54-206ENST00000549271 SYNJ2BP-COX16A0A087WUM0 186 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 SPTY2D1-AS1A0A0U1RR47 76 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 FAM170AA1A519 330 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 DRGXA6NNA5 263 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 A6NNZ2 444 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 H3BM21 787 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 M0QYT0 321 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 MUSKO15146 869 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 AQP9O43315 295 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 F9P00740 461 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 TPM2P07951 284 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 SRCP12931 536 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 CDK11BP21127 795 aaKnown RBP12.41□□□□□ -0.42
DDX54-206ENST00000549271 SOX5P35711 763 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 SCNN1AP37088 669 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 CLCN6P51797 869 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 KRT83P78385 493 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 UBXN1Q04323 297 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 NME3Q13232 169 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 SPIDRQ14159 915 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 DEFB133Q30KQ1 61 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 RAB11FIP2Q7L804 512 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 SETD3Q86TU7 594 aaPredicted RBP12.41□□□□□ -0.42
DDX54-206ENST00000549271 VASH2Q86V25 355 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 XYLT1Q86Y38 959 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 SLC35F3Q8IY50 421 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 OR2A12Q8NGT7 310 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 CPA5Q8WXQ8 436 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 NAT6Q93015 286 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 C18orf8Q96DM3 657 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 BMFQ96LC9 184 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 CCDC114Q96M63 670 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 ERGIC2Q96RQ1 377 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 PSMB7Q99436 277 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms