RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 GPR141Q7Z602 305 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 FAM72BQ86X60 149 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.88□□□□□ -0.19
HDAC7-228ENST00000548938 ANKRD52Q8NB46 1076 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 TXNDC5Q8NBS9 432 aaKnown RBP13.88□□□□□ -0.19
HDAC7-228ENST00000548938 TOP1MTQ969P6 601 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 NXNL1Q96CM4 212 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 UHRF1Q96T88 793 aaPredicted RBP13.88□□□□□ -0.19
HDAC7-228ENST00000548938 NFKBIZQ9BYH8 718 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 OSBPL2Q9H1P3 480 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 TUBGCP4Q9UGJ1 667 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 ZNHIT2Q9UHR6 403 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 CDC14AQ9UNH5 594 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 SLC8A2Q9UPR5 921 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 ZNF711Q9Y462 761 aa13.88□□□□□ -0.19
HDAC7-228ENST00000548938 NEMP2A6NFY4 417 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 TRPC5OSA6NMA1 111 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 FAM155AB1AL88 458 aaPredicted RBP13.87□□□□□ -0.19
HDAC7-228ENST00000548938 TFPTP0C1Z6 253 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 NFKB1P19838 968 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 VARSP26640 1264 aaKnown RBP13.87□□□□□ -0.19
HDAC7-228ENST00000548938 NUP107P57740 925 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 SFSWAPQ12872 951 aaKnown RBP13.87□□□□□ -0.19
HDAC7-228ENST00000548938 ZBTB17Q13105 803 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 NME3Q13232 169 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 FASTKQ14296 549 aaKnown RBP13.87□□□□□ -0.19
HDAC7-228ENST00000548938 PPP1R3AQ16821 1122 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 AGKQ53H12 422 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 FASTKD5Q7L8L6 764 aaKnown RBP13.87□□□□□ -0.19
HDAC7-228ENST00000548938 GPR180Q86V85 440 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 CROCCP3Q8IVE0 287 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 CEP97Q8IW35 865 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 MFSD6LQ8IWD5 586 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 C12orf43Q96C57 262 aaKnown RBP13.87□□□□□ -0.19
HDAC7-228ENST00000548938 ZMAT2Q96NC0 199 aaKnown RBP13.87□□□□□ -0.19
HDAC7-228ENST00000548938 SLC39A3Q9BRY0 314 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 DNAI2Q9GZS0 605 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 TMEM165Q9HC07 324 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 TNFRSF12AQ9NP84 129 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 SPAG4Q9NPE6 437 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 AKT3Q9Y243 479 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 CITO14578 2027 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 SAC3D1A6NKF1 404 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 SUPT3HO75486 399 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 AHSGP02765 367 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 SCNN1AP37088 669 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 MPP1Q00013 466 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 CBX3Q13185 183 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 PITRM1Q5JRX3 1037 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 ZNF786Q8N393 782 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 NPWQ8N729 165 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 SLC2A14Q8TDB8 520 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 GPR78Q96P69 363 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 ZNF408Q9H9D4 720 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 TBCCD1Q9NVR7 557 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 SFMBT1Q9UHJ3 866 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 ACOT9Q9Y305 439 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 SH3GLB1Q9Y371 365 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 CROCCQ5TZA2 2017 aa13.87□□□□□ -0.19
HDAC7-228ENST00000548938 HBP1O60381 514 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 PGK2P07205 417 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 ERCC2P18074 760 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 LMO2P25791 158 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 ADIGQ0VDE8 80 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 STX5Q13190 355 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 RPS27LQ71UM5 84 aaKnown RBP13.86□□□□□ -0.19
HDAC7-228ENST00000548938 DENND6AQ8IWF6 608 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 OR9I1Q8NGQ6 314 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 SPPL2BQ8TCT7 592 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 TFAP2CQ92754 450 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 PBXIP1Q96AQ6 731 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 C18orf25Q96B23 403 aaPredicted RBP13.86□□□□□ -0.19
HDAC7-228ENST00000548938 GBA3Q9H227 469 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 POMKQ9H5K3 350 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 CD300AQ9UGN4 299 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 SARDHQ9UL12 918 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 TLL2Q9Y6L7 1015 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 M0QYT0 321 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 PSMD12O00232 456 aaPredicted RBP13.86□□□□□ -0.19
HDAC7-228ENST00000548938 AKAP10O43572 662 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 SLC25A27O95847 323 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 HADHAP40939 763 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 MAGEA10P43363 369 aaPredicted RBP13.86□□□□□ -0.19
HDAC7-228ENST00000548938 SLC5A3P53794 718 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 C1QTNF8P60827 252 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 NAA20P61599 178 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 PRKCQQ04759 706 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 TRAP1Q12931 704 aaKnown RBP13.86□□□□□ -0.19
HDAC7-228ENST00000548938 FBXO16Q8IX29 292 aaPredicted RBP13.86□□□□□ -0.19
HDAC7-228ENST00000548938 TRPC4APQ8TEL6 797 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 CANT1Q8WVQ1 401 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 SLC10A4Q96EP9 437 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 MRPL40Q9NQ50 206 aaKnown RBP13.86□□□□□ -0.19
HDAC7-228ENST00000548938 VPS45Q9NRW7 570 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 PIGVQ9NUD9 493 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 SMOXQ9NWM0 555 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 BLOC1S6Q9UL45 172 aa13.86□□□□□ -0.19
HDAC7-228ENST00000548938 MRASO14807 208 aa13.85□□□□□ -0.19
HDAC7-228ENST00000548938 TSPAN1O60635 241 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms