RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.52□□□□□ -0.41
RAB5B-204ENST00000548068 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.52□□□□□ -0.41
RAB5B-204ENST00000548068 GABPB2Q8TAK5 448 aaPredicted RBP12.52□□□□□ -0.41
RAB5B-204ENST00000548068 WFIKKN2Q8TEU8 576 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 ZNF669Q96BR6 464 aaPredicted RBP12.52□□□□□ -0.41
RAB5B-204ENST00000548068 RANBP9Q96S59 729 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 KIFC1Q9BW19 673 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 APOL5Q9BWW9 433 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 PIH1D1Q9NWS0 290 aaKnown RBP12.52□□□□□ -0.41
RAB5B-204ENST00000548068 LHX3Q9UBR4 397 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 ZNF180Q9UJW8 692 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 ACTL7BQ9Y614 415 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 RPS6KL1Q9Y6S9 549 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 LAMA2P24043 3122 aaKnown RBP12.52□□□□□ -0.41
RAB5B-204ENST00000548068 IQANK1A0A1B0GTG1 560 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.51□□□□□ -0.41
RAB5B-204ENST00000548068 LOC285095A0A1B0GVY8 99 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 A6NNZ2 444 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 HEPACAM2A8MVW5 462 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 MUSKO15146 869 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 ATP9BO43861 1147 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 NDST3O95803 873 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 IGSF6O95976 241 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 CYP17A1P05093 508 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 ALADP13716 330 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 ADRA1DP25100 572 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 RGS19P49795 217 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 SERPINB9P50453 376 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 SCNN1BP51168 640 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 MAGOHP61326 146 aaKnown RBP12.51□□□□□ -0.41
RAB5B-204ENST00000548068 CRADDP78560 199 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 MGAT5Q09328 741 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 OLIG2Q13516 323 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 DHCR24Q15392 516 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 EML3Q32P44 896 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 TUBB8Q3ZCM7 444 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 ANKRD20A4Q4UJ75 823 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 TNFAIP8L3Q5GJ75 292 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 CERCAMQ5T4B2 595 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 DENND5AQ6IQ26 1287 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 PKN3Q6P5Z2 889 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 ADGRD1Q6QNK2 874 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 LINGO4Q6UY18 593 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 KDM7AQ6ZMT4 941 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 MARK2Q7KZI7 788 aaKnown RBP12.51□□□□□ -0.41
RAB5B-204ENST00000548068 SLC26A11Q86WA9 606 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 CTAGE3PQ8IX95 158 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 SLC44A1Q8WWI5 657 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 ISG20Q96AZ6 181 aaKnown RBP12.51□□□□□ -0.41
RAB5B-204ENST00000548068 LMLNQ96KR4 655 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 DHRS4Q9BTZ2 278 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 ADGRE3Q9BY15 652 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 CEP44Q9C0F1 390 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 LINC00597Q9H2U6 94 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 CNOT10Q9H9A5 744 aaKnown RBP12.51□□□□□ -0.41
RAB5B-204ENST00000548068 NOD2Q9HC29 1040 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 ZFP14Q9HCL3 533 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 NSMCE4AQ9NXX6 385 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 EURLQ9NYK6 297 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 MOCS1Q9NZB8 636 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 PRKAG3Q9UGI9 489 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 HS3ST2Q9Y278 367 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 TCAF1Q9Y4C2 921 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 FAM169AQ9Y6X4 670 aa12.51□□□□□ -0.41
RAB5B-204ENST00000548068 ANKRD36A6QL64 1941 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 MYLKQ15746 1914 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.5□□□□□ -0.41
RAB5B-204ENST00000548068 KRT37O76014 449 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 KRT38O76015 456 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 CD160O95971 181 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 ASLP04424 464 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 TPH1P17752 444 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 KRT15P19012 456 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 POLR2EP19388 210 aaKnown RBP12.5□□□□□ -0.41
RAB5B-204ENST00000548068 POU3F3P20264 500 aaPredicted RBP12.5□□□□□ -0.41
RAB5B-204ENST00000548068 CNTFP26441 200 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 GCAP28676 217 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 HLA-FP30511 346 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 VIPR2P41587 438 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 PPP2R2AP63151 447 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 SEPT6Q14141 434 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 POU6F1Q14863 301 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 SKIDA1Q1XH10 827 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 FUT11Q495W5 492 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 SIRPB2Q5JXA9 342 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 EMC10Q5UCC4 262 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 PDPK2PQ6A1A2 396 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 KIAA0907Q7Z7F0 614 aaPredicted RBP12.5□□□□□ -0.41
RAB5B-204ENST00000548068 SRLQ86TD4 932 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 RASSF3Q86WH2 238 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 YAF2Q8IY57 180 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 CPA6Q8N4T0 437 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 SH2D3CQ8N5H7 860 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 SLC25A41Q8N5S1 370 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 PPM1NQ8N819 430 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 PEX13Q92968 403 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 MTBPQ96DY7 904 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 CERS2Q96G23 380 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 NECTIN4Q96NY8 510 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 PLAC1Q9HBJ0 212 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms