RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 SLC10A7Q0GE19 358 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 LBRQ14739 615 aaKnown RBP18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 TMCO4Q5TGY1 634 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 TRIM69Q86WT6 500 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 ATPAF2Q8N5M1 289 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 ZNF599Q96NL3 588 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 RTKNQ9BST9 563 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 CINPQ9BW66 212 aaPredicted RBP18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 GTPBP2Q9BX10 602 aaKnown RBP18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 CPEB1Q9BZB8 566 aaKnown RBP18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 PCDH15Q96QU1 1955 aa18.98■□□□□ 0.63
PRPF40B-206ENST00000547764 GOLGA6L6A8MZA4 724 aa18.97■□□□□ 0.63
PRPF40B-206ENST00000547764 MUSKO15146 869 aa18.97■□□□□ 0.63
PRPF40B-206ENST00000547764 RNGTTO60942 597 aaKnown RBP18.97■□□□□ 0.63
PRPF40B-206ENST00000547764 CSNK1DP48730 415 aa18.97■□□□□ 0.63
PRPF40B-206ENST00000547764 ATXN3P54252 364 aaPredicted RBP18.97■□□□□ 0.63
PRPF40B-206ENST00000547764 RACK1P63244 317 aaKnown RBP18.97■□□□□ 0.63
PRPF40B-206ENST00000547764 GRIK2Q13002 908 aa18.97■□□□□ 0.63
PRPF40B-206ENST00000547764 NEK5Q6P3R8 708 aa18.97■□□□□ 0.63
PRPF40B-206ENST00000547764 PRPF39Q86UA1 669 aaKnown RBP18.97■□□□□ 0.63
PRPF40B-206ENST00000547764 SLC6A18Q96N87 628 aa18.97■□□□□ 0.63
PRPF40B-206ENST00000547764 RNF157Q96PX1 679 aa18.97■□□□□ 0.63
PRPF40B-206ENST00000547764 LACRTQ9GZZ8 138 aa18.97■□□□□ 0.63
PRPF40B-206ENST00000547764 SEPT3Q9UH03 358 aa18.97■□□□□ 0.63
PRPF40B-206ENST00000547764 FADS3Q9Y5Q0 445 aa18.97■□□□□ 0.63
PRPF40B-206ENST00000547764 DUSP10Q9Y6W6 482 aa18.97■□□□□ 0.63
PRPF40B-206ENST00000547764 A0A1B0GVT2 93 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 A0A1W2PQU0 124 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 ZNF487B1APH4 448 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 PCDH8O95206 1070 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 PIGNO95427 931 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 KRT1P04264 644 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 GRIA4P48058 902 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 VAV2P52735 878 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 BNC1Q01954 994 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 NSUN2Q08J23 767 aaKnown RBP eCLIP18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 GALNT2Q10471 571 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 TEAD4Q15561 434 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 C11orf63Q6NUN7 778 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 LAYNQ6UX15 382 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 SRLQ86TD4 932 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 VSIG1Q86XK7 387 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 LRRC49Q8IUZ0 686 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 MINDY1Q8N5J2 469 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 OR2I1PQ8NGU4 316 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 TPCN2Q8NHX9 752 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 RNF25Q96BH1 459 aaPredicted RBP18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 SERAC1Q96JX3 654 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 PSKH2Q96QS6 385 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 ZDHHC5Q9C0B5 715 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 DDX56Q9NY93 547 aaKnown RBP18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 KNL1Q8NG31 2342 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 DNAH14Q0VDD8 3507 aa18.96■□□□□ 0.63
PRPF40B-206ENST00000547764 PLXNA2O75051 1894 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 DCDC2BA2VCK2 349 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 BTNL10A8MVZ5 291 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 TM4SF5O14894 197 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 WNT9AO14904 365 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 PJA2O43164 708 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 AP1G1O43747 822 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 MAP3K6O95382 1288 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 GARSP41250 739 aaKnown RBP18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 ABL2P42684 1182 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 RENBPP51606 427 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 GBE1Q04446 702 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 SLC10A2Q12908 348 aaPredicted RBP18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 GRM3Q14832 879 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 UAP1L1Q3KQV9 507 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 TTC7BQ86TV6 843 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 HORMAD1Q86X24 394 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 RAB7BQ96AH8 199 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 TUBGCP5Q96RT8 1024 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 SUV39H2Q9H5I1 410 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 AASDHPPTQ9NRN7 309 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 DKK3Q9UBP4 350 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 ZFR2Q9UPR6 939 aaKnown RBP18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 DOCK9Q9BZ29 2069 aa18.95■□□□□ 0.62
PRPF40B-206ENST00000547764 PSTPIP1O43586 416 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 GJB3O75712 270 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 TIMP2P16035 220 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 NUDT1P36639 197 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 SCNN1BP51168 640 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 GSDMDP57764 484 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 ZNF235Q14590 738 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 KIF19Q2TAC6 998 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 ZNF284Q2VY69 593 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 SETMARQ53H47 684 aaPredicted RBP18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 ODF2Q5BJF6 829 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 SEL1L3Q68CR1 1132 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 NAPEPLDQ6IQ20 393 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 ADAT2Q7Z6V5 191 aaKnown RBP18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 DAAM2Q86T65 1068 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 KIAA1328Q86T90 577 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 CAMK1DQ8IU85 385 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 PGBD5Q8N414 524 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 PLD5Q8N7P1 536 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 NSMCE1Q8WV22 266 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 KLK6Q92876 244 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 FEM1CQ96JP0 617 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 ZNF641Q96N77 438 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms