RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 KLC2Q9H0B6 622 aa12.3□□□□□ -0.44
HDAC7-226ENST00000547259 MAGEH1Q9H213 219 aa12.3□□□□□ -0.44
HDAC7-226ENST00000547259 FBRSQ9HAH7 460 aa12.3□□□□□ -0.44
HDAC7-226ENST00000547259 ATP13A1Q9HD20 1204 aa12.3□□□□□ -0.44
HDAC7-226ENST00000547259 ELOVL2Q9NXB9 296 aa12.3□□□□□ -0.44
HDAC7-226ENST00000547259 SMARCAL1Q9NZC9 954 aa12.3□□□□□ -0.44
HDAC7-226ENST00000547259 USP36Q9P275 1121 aaKnown RBP12.3□□□□□ -0.44
HDAC7-226ENST00000547259 GGA2Q9UJY4 613 aa12.3□□□□□ -0.44
HDAC7-226ENST00000547259 VPS28Q9UK41 221 aa12.3□□□□□ -0.44
HDAC7-226ENST00000547259 MUC22E2RYF6 1773 aaPredicted RBP12.29□□□□□ -0.44
HDAC7-226ENST00000547259 A0A0D9SEW6 157 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 TCRBV7S2A1N4TA0A589 114 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 BCAT2O15382 392 aaPredicted RBP12.29□□□□□ -0.44
HDAC7-226ENST00000547259 IGLV3-19P01714 112 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 MZF1P28698 734 aaPredicted RBP12.29□□□□□ -0.44
HDAC7-226ENST00000547259 HLA-FP30511 346 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 PAFAH1B1P43034 410 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 NR2C2P49116 596 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 GRIK2Q13002 908 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 KLF1Q13351 362 aaPredicted RBP12.29□□□□□ -0.44
HDAC7-226ENST00000547259 SLC12A1Q13621 1099 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 AFMIDQ63HM1 303 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 BZW1Q7L1Q6 419 aaKnown RBP12.29□□□□□ -0.44
HDAC7-226ENST00000547259 PROSER1Q86XN7 944 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 TMPRSS6Q8IU80 811 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 ARHGAP12Q8IWW6 846 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 ATPAF2Q8N5M1 289 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.29□□□□□ -0.44
HDAC7-226ENST00000547259 OR7D4Q8NG98 312 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 ACTL9Q8TC94 416 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 WFIKKN2Q8TEU8 576 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 ARHGEF2Q92974 986 aaKnown RBP12.29□□□□□ -0.44
HDAC7-226ENST00000547259 HMCESQ96FZ2 354 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 SPON2Q9BUD6 331 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 NOL6Q9H6R4 1146 aaKnown RBP12.29□□□□□ -0.44
HDAC7-226ENST00000547259 LRRC19Q9H756 370 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 DTLQ9NZJ0 730 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 SAE1Q9UBE0 346 aaPredicted RBP12.29□□□□□ -0.44
HDAC7-226ENST00000547259 TTC7AQ9ULT0 858 aaPredicted RBP12.29□□□□□ -0.44
HDAC7-226ENST00000547259 PLA2G4CQ9UP65 541 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 PCDHGB2Q9Y5G2 931 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 RAD54BQ9Y620 910 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 ITPR1Q14643 2758 aa12.29□□□□□ -0.44
HDAC7-226ENST00000547259 GOLGA6L10A0A0M3HER8 536 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 METTL12A8MUP2 240 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 CBX4O00257 560 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 PPP1R12AO14974 1030 aaPredicted RBP12.28□□□□□ -0.44
HDAC7-226ENST00000547259 MCF2LO15068 1137 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 FLRT2O43155 660 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 FTH1P19P0C7X4 201 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 MX2P20592 715 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 ACVRL1P37023 503 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 PAPOLAP51003 745 aaKnown RBP12.28□□□□□ -0.44
HDAC7-226ENST00000547259 TPMTP51580 245 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 OTUD4Q01804 1114 aaKnown RBP12.28□□□□□ -0.44
HDAC7-226ENST00000547259 GALNT2Q10471 571 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 SFSWAPQ12872 951 aaKnown RBP12.28□□□□□ -0.44
HDAC7-226ENST00000547259 PDK1Q15118 436 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 NOMO1Q15155 1222 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 TEAD4Q15561 434 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 PITRM1Q5JRX3 1037 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 SERPINA13PQ6UXR4 307 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 CREG2Q8IUH2 290 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 TP53INP2Q8IXH6 220 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 APCDD1Q8J025 514 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 DCAF4L2Q8NA75 395 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 SETD7Q8WTS6 366 aaKnown RBP12.28□□□□□ -0.44
HDAC7-226ENST00000547259 FAM118BQ9BPY3 351 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 FEM1AQ9BSK4 669 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 C2orf49Q9BVC5 232 aaPredicted RBP12.28□□□□□ -0.44
HDAC7-226ENST00000547259 GPR174Q9BXC1 333 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 MIR1-1HGQ9H1L0 117 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 CCDC86Q9H6F5 360 aaKnown RBP12.28□□□□□ -0.44
HDAC7-226ENST00000547259 SP110Q9HB58 689 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 FSCN3Q9NQT6 498 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 RNF14Q9UBS8 474 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 HPCAL4Q9UM19 191 aa12.28□□□□□ -0.44
HDAC7-226ENST00000547259 LAMA5O15230 3695 aa12.27□□□□□ -0.44
HDAC7-226ENST00000547259 ADAMTS20P59510 1910 aa12.27□□□□□ -0.44
HDAC7-226ENST00000547259 WASH3PC4AMC7 463 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 H7C0C1 242 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 KRIT1O00522 736 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 POLR2EP19388 210 aaKnown RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 GARSP41250 739 aaKnown RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 IL12RB1P42701 662 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 ATP5OP48047 213 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 AFF3P51826 1226 aaKnown RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 PLK1P53350 603 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 EIF3EP60228 445 aaKnown RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 FAM193AP78312 1265 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 ZBTB16Q05516 673 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 CKAP4Q07065 602 aaKnown RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 SLC10A2Q12908 348 aaPredicted RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 SERINC3Q13530 473 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 COL9A2Q14055 689 aaPredicted RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 ZNF234Q14588 700 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 SIX1Q15475 284 aaPredicted RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 GEN1Q17RS7 908 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 MBLAC2Q68D91 279 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 TIGD7Q6NT04 549 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms