RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 ACSL1P33121 698 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 SCNN1BP51168 640 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 MAXP61244 160 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 CNTN1Q12860 1018 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 ZBTB17Q13105 803 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 PLK5Q496M5 336 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 GDPD4Q6W3E5 623 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 SLC13A5Q86YT5 568 aaPredicted RBP20.73■□□□□ 0.91
HMGA2-211ENST00000545998 PPP1R16AQ96I34 528 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 NSMCE3Q96MG7 304 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 NUDCD1Q96RS6 583 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 TUBGCP5Q96RT8 1024 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 HDAC8Q9BY41 377 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 BTBD1Q9H0C5 482 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 ATP8A1Q9Y2Q0 1164 aa20.73■□□□□ 0.91
HMGA2-211ENST00000545998 ZFHX2Q9C0A1 2572 aaPredicted RBP20.73■□□□□ 0.91
HMGA2-211ENST00000545998 TTC24A2A3L6 582 aaPredicted RBP20.72■□□□□ 0.91
HMGA2-211ENST00000545998 PLK4O00444 970 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 MAP3K13O43283 966 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 PIGNO95427 931 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 HLA-DQB2P05538 268 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 CXCR5P32302 372 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 MAPK8P45983 427 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 AP1S1P61966 158 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 GRM3Q14832 879 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 SLC45A4Q5BKX6 768 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 ZNF805Q5CZA5 627 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 PIP5KL1Q5T9C9 394 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 AGBL4Q5VU57 503 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 ALG1LQ6GMV1 187 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 NCEH1Q6PIU2 408 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.72■□□□□ 0.91
HMGA2-211ENST00000545998 PRR23BQ6ZRT6 265 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 TTC13Q8NBP0 860 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 FAM118BQ9BPY3 351 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 POLR1EQ9GZS1 481 aaKnown RBP20.72■□□□□ 0.91
HMGA2-211ENST00000545998 SEMA4AQ9H3S1 761 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 SGK2Q9HBY8 427 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 DYRK4Q9NR20 520 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 TNRC6BQ9UPQ9 1833 aaKnown RBP20.72■□□□□ 0.91
HMGA2-211ENST00000545998 SLC7A4O43246 635 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 ATP1A1P05023 1023 aaKnown RBP20.72■□□□□ 0.91
HMGA2-211ENST00000545998 EIF3EP60228 445 aaKnown RBP20.72■□□□□ 0.91
HMGA2-211ENST00000545998 RPL6Q02878 288 aaKnown RBP20.72■□□□□ 0.91
HMGA2-211ENST00000545998 RALGPS1Q5JS13 557 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 PMS2CLQ68D20 193 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 ERN2Q76MJ5 926 aaKnown RBP20.72■□□□□ 0.91
HMGA2-211ENST00000545998 C17orf53Q8N3J3 647 aaPredicted RBP20.72■□□□□ 0.91
HMGA2-211ENST00000545998 CNTD1Q8N815 330 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 SUMF1Q8NBK3 374 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 KLHL32Q96NJ5 620 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 ATP13A3Q9H7F0 1226 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 NOD2Q9HC29 1040 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 SCUBE2Q9NQ36 999 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 HAUS2Q9NVX0 235 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 SEPT10Q9P0V9 454 aa20.72■□□□□ 0.91
HMGA2-211ENST00000545998 R3HDM2Q9Y2K5 976 aaKnown RBP20.72■□□□□ 0.91
HMGA2-211ENST00000545998 OTOGLQ3ZCN5 2332 aa20.71■□□□□ 0.91
HMGA2-211ENST00000545998 PROB1E7EW31 1015 aa20.71■□□□□ 0.91
HMGA2-211ENST00000545998 H7C0C1 242 aa20.71■□□□□ 0.91
HMGA2-211ENST00000545998 MTSS1O43312 755 aa20.71■□□□□ 0.91
HMGA2-211ENST00000545998 NDUFS2O75306 463 aa20.71■□□□□ 0.91
HMGA2-211ENST00000545998 ATP5OP48047 213 aa20.71■□□□□ 0.91
HMGA2-211ENST00000545998 ADPRHP54922 357 aa20.71■□□□□ 0.91
HMGA2-211ENST00000545998 WASHC5Q12768 1159 aa20.71■□□□□ 0.91
HMGA2-211ENST00000545998 PARS2Q7L3T8 475 aaKnown RBP20.71■□□□□ 0.91
HMGA2-211ENST00000545998 CAMK1DQ8IU85 385 aa20.71■□□□□ 0.91
HMGA2-211ENST00000545998 ZNF641Q96N77 438 aaPredicted RBP20.71■□□□□ 0.91
HMGA2-211ENST00000545998 CEP41Q9BYV8 373 aa20.71■□□□□ 0.91
HMGA2-211ENST00000545998 SUV39H2Q9H5I1 410 aa20.71■□□□□ 0.91
HMGA2-211ENST00000545998 SMG5Q9UPR3 1016 aaKnown RBP20.71■□□□□ 0.91
HMGA2-211ENST00000545998 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 C16orf96A6NNT2 1141 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 NEBLO76041 1014 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 SEMA4FO95754 770 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 RBP3P10745 1247 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 PTPN3P26045 913 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 GNG11P61952 73 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 BCL2L1Q07817 233 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 ITKQ08881 620 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 ELF2Q15723 593 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 TEX44Q53QW1 395 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 SPDYCQ5MJ68 293 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 FAM182AQ5T1J6 154 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 LPCAT2Q7L5N7 544 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 TMEFF1Q8IYR6 380 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 HTR3CQ8WXA8 447 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 PHOX2BQ99453 314 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 SEMA3CQ99985 751 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 GPR174Q9BXC1 333 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 C10orf88Q9H8K7 445 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 DKK3Q9UBP4 350 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 TTLL3Q9Y4R7 772 aa20.7■□□□□ 0.9
HMGA2-211ENST00000545998 RIF1Q5UIP0 2472 aaKnown RBP20.69■□□□□ 0.9
HMGA2-211ENST00000545998 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.69■□□□□ 0.9
HMGA2-211ENST00000545998 PLRG1O43660 514 aaKnown RBP20.69■□□□□ 0.9
HMGA2-211ENST00000545998 CEP104O60308 925 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 RHOBTB1O94844 696 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 ADRB3P13945 408 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 CES1P23141 567 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms