RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 CFAP58Q5T655 872 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 FAM46CQ5VWP2 391 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 ZNF776Q68DI1 518 aaPredicted RBP13.16□□□□□ -0.3
CDCA3-210ENST00000545368 KIAA1211LQ6NV74 962 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 SYDE1Q6ZW31 735 aaPredicted RBP13.16□□□□□ -0.3
CDCA3-210ENST00000545368 BMP8AQ7Z5Y6 402 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 FBXL6Q8N531 539 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 CHST14Q8NCH0 376 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 TSTD1Q8NFU3 115 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 GRIN3AQ8TCU5 1115 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 SLCO2A1Q92959 643 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 LRRC45Q96CN5 670 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 PPP1R16AQ96I34 528 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 FCRL5Q96RD9 977 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 OSBPL1AQ9BXW6 950 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 EPHX3Q9H6B9 360 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 PCDH9Q9HC56 1237 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 SPATA6Q9NWH7 488 aaPredicted RBP13.16□□□□□ -0.3
CDCA3-210ENST00000545368 DLGAP2Q9P1A6 1054 aa13.16□□□□□ -0.3
CDCA3-210ENST00000545368 TTC24A2A3L6 582 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-210ENST00000545368 F5H423 210 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-210ENST00000545368 PI15O43692 258 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 SOCS5O75159 536 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 LEFTY1O75610 366 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 ANXA9O76027 345 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 ADH1BP00325 375 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 IL1BP01584 269 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 DNTTP04053 509 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 PSMB4P28070 264 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 CD68P34810 354 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-210ENST00000545368 FDFT1P37268 417 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 CD86P42081 329 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 TNNT3P45378 269 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-210ENST00000545368 CXCL12P48061 93 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 PSMD8P48556 350 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 GEMP55040 296 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 NIPAL4Q0D2K0 466 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 SLC14A2Q15849 920 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 PARP6Q2NL67 630 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 NCEH1Q6PIU2 408 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 TMEM92Q6UXU6 159 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 MAATS1Q7Z4T9 603 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 MMAAQ8IVH4 418 aaKnown RBP13.15□□□□□ -0.3
CDCA3-210ENST00000545368 TMIEQ8NEW7 156 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 ARRDC2Q8TBH0 407 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 PIP4K2CQ8TBX8 421 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 PRCCQ92733 491 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-210ENST00000545368 IMP4Q96G21 291 aaKnown RBP13.15□□□□□ -0.3
CDCA3-210ENST00000545368 RBM15Q96T37 977 aaKnown RBP eCLIP13.15□□□□□ -0.32e-9■■■□□ 17.2
CDCA3-210ENST00000545368 CARD6Q9BX69 1037 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 CPEB1Q9BZB8 566 aaKnown RBP13.15□□□□□ -0.3
CDCA3-210ENST00000545368 RSPH9Q9H1X1 276 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-210ENST00000545368 L2HGDHQ9H9P8 463 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 NOD2Q9HC29 1040 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 DYRK4Q9NR20 520 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 VPS45Q9NRW7 570 aa13.15□□□□□ -0.3
CDCA3-210ENST00000545368 BCCIPQ9P287 314 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDCA3-210ENST00000545368 AAR2Q9Y312 384 aaKnown RBP13.15□□□□□ -0.3
CDCA3-210ENST00000545368 FAM187AA6NFU0 413 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 E7EVH7 732 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 KPNA3O00505 521 aaPredicted RBP13.14□□□□□ -0.31
CDCA3-210ENST00000545368 GJB3O75712 270 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 PIGNO95427 931 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 UGT2B4P06133 528 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 CTSLP07711 333 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 ZSCAN5DPP0CG00 497 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 ACADMP11310 421 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 ETS1P14921 441 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 GKP32189 559 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 RPL22P35268 128 aaKnown RBP13.14□□□□□ -0.31
CDCA3-210ENST00000545368 VPS41P49754 854 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 COPAP53621 1224 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 BASP1P80723 227 aaKnown RBP13.14□□□□□ -0.31
CDCA3-210ENST00000545368 SKOR1P84550 965 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 SATB1Q01826 763 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 ZBTB16Q05516 673 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 SFSWAPQ12872 951 aaKnown RBP13.14□□□□□ -0.31
CDCA3-210ENST00000545368 MPP3Q13368 585 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 PTK6Q13882 451 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 TRIP13Q15645 432 aaPredicted RBP13.14□□□□□ -0.31
CDCA3-210ENST00000545368 CST6Q15828 149 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 TTC31Q49AM3 519 aaPredicted RBP13.14□□□□□ -0.31
CDCA3-210ENST00000545368 ARSIQ5FYB1 569 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 FAM182AQ5T1J6 154 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 C8orf74Q6P047 294 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 KIAA1324Q6UXG2 1013 aaKnown RBP13.14□□□□□ -0.31
CDCA3-210ENST00000545368 GDPD4Q6W3E5 623 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 PRUNE1Q86TP1 453 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 CACUL1Q86Y37 369 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 JAMLQ86YT9 394 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 TMPRSS6Q8IU80 811 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 PGBD3Q8N328 593 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 GLIS1Q8NBF1 620 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 HMGB4Q8WW32 186 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 SIPA1Q96FS4 1042 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 ZNF641Q96N77 438 aaPredicted RBP13.14□□□□□ -0.31
CDCA3-210ENST00000545368 HHIPQ96QV1 700 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 FAM129BQ96TA1 746 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 FSD1LQ9BXM9 530 aa13.14□□□□□ -0.31
CDCA3-210ENST00000545368 CD248Q9HCU0 757 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms