RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 TPI1P60174 286 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 MMRN1Q13201 1228 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 SMAD1Q15797 465 aaKnown RBP12.71□□□□□ -0.37
ACTN1-206ENST00000544964 DPYSL2Q16555 572 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 PRAMEF14Q5SWL7 426 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 TTC39BQ5VTQ0 682 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-206ENST00000544964 RNF219Q5W0B1 726 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-206ENST00000544964 PEX26Q7Z412 305 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 POLNQ7Z5Q5 900 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 NT5DC3Q86UY8 548 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 GATAD2AQ86YP4 633 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 CCDC117Q8IWD4 279 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-206ENST00000544964 SYCE1Q8N0S2 351 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 C17orf53Q8N3J3 647 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-206ENST00000544964 KCTD6Q8NC69 237 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 RAPGEF5Q92565 580 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 KRT35Q92764 455 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 OMDQ99983 421 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 CWC15Q9P013 229 aaKnown RBP12.71□□□□□ -0.37
ACTN1-206ENST00000544964 PPARGC1AQ9UBK2 798 aaKnown RBP12.71□□□□□ -0.37
ACTN1-206ENST00000544964 AMFRQ9UKV5 643 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 OR51B4Q9Y5P0 310 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 BPTFQ12830 3046 aa12.71□□□□□ -0.38
ACTN1-206ENST00000544964 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-206ENST00000544964 LRRD1A4D1F6 860 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 FAM149AA5PLN7 773 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 H3BRJ5 948 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 DAPK3O43293 454 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 PSTPIP1O43586 416 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 CLDN11O75508 207 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 RHOQP17081 205 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 KDELR1P24390 212 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 CD38P28907 300 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 EPHA8P29322 1005 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-206ENST00000544964 ARL4AP40617 200 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 VASPP50552 380 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-206ENST00000544964 DNA2P51530 1060 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 NXPH1P58417 271 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 SFSWAPQ12872 951 aaKnown RBP12.7□□□□□ -0.38
ACTN1-206ENST00000544964 ZNF177Q13360 481 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-206ENST00000544964 SLC12A1Q13621 1099 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 DPYSL3Q14195 570 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 INAVAQ3KP66 663 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 LRRC38Q5VT99 294 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 AGBL4Q5VU57 503 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 DHRS13Q6UX07 377 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 RFX8Q6ZV50 586 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 OR14C36Q8NHC7 312 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 SAP25Q8TEE9 199 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 RNF25Q96BH1 459 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-206ENST00000544964 CALN1Q9BXU9 219 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 AASDHPPTQ9NRN7 309 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 NDFIP2Q9NV92 336 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 DDX56Q9NY93 547 aaKnown RBP12.7□□□□□ -0.38
ACTN1-206ENST00000544964 FTSJ1Q9UET6 329 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 DNAI1Q9UI46 699 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 SARDHQ9UL12 918 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 RAXQ9Y2V3 346 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 CHD5Q8TDI0 1954 aa12.7□□□□□ -0.38
ACTN1-206ENST00000544964 GCN1Q92616 2671 aaKnown RBP12.69□□□□□ -0.38
ACTN1-206ENST00000544964 PLRG1O43660 514 aaKnown RBP12.69□□□□□ -0.38
ACTN1-206ENST00000544964 ATP9BO43861 1147 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 DFNA5O60443 496 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 IL1BP01584 269 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 AMPD1P23109 780 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 IL4RP24394 825 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 CTNNA2P26232 953 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 CTNNA1P35221 906 aaKnown RBP12.69□□□□□ -0.38
ACTN1-206ENST00000544964 SULT2A1Q06520 285 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 COL9A2Q14055 689 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-206ENST00000544964 PDK2Q15119 407 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 COL28A1Q2UY09 1125 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 NAPEPLDQ6IQ20 393 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 C19orf48Q6RUI8 117 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 Q6ZVU0 165 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 KANSL1Q7Z3B3 1105 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 NLRP14Q86W24 1093 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 SPATS2Q86XZ4 545 aaKnown RBP12.69□□□□□ -0.38
ACTN1-206ENST00000544964 GALNT15Q8N3T1 639 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 FAM71BQ8TC56 605 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 TSC1Q92574 1164 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 SERAC1Q96JX3 654 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 CSPG4P5Q96PW8 444 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 ALS2CR12Q96Q35 445 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 CATSPERBQ9H7T0 1116 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 TMEM248Q9NWD8 314 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 ZNF212Q9UDV6 495 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 PCDHA3Q9Y5H8 950 aa12.69□□□□□ -0.38
ACTN1-206ENST00000544964 CCDC66A2RUB6 948 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 C3orf70A6NLC5 250 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-206ENST00000544964 FGF10O15520 208 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-206ENST00000544964 DDX3YO15523 660 aaKnown RBP12.68□□□□□ -0.38
ACTN1-206ENST00000544964 SLC7A4O43246 635 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 RHOCP08134 193 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 ERCC2P18074 760 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 OR1E1P30953 314 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 HTR7P34969 479 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 HCAR3P49019 387 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 ACADVLP49748 655 aa12.68□□□□□ -0.38
ACTN1-206ENST00000544964 CLDN6P56747 220 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms