RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ARMCX6Q7L4S7 300 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 LPCAT2Q7L5N7 544 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 ZC3H18Q86VM9 953 aaKnown RBP15.28■□□□□ 0.04
CD9-210ENST00000543916 SLC41A1Q8IVJ1 513 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 SLC35F6Q8N357 371 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 BBS5Q8N3I7 341 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 ACTL9Q8TC94 416 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 NKD2Q969F2 451 aaPredicted RBP15.28■□□□□ 0.04
CD9-210ENST00000543916 PPP1R16AQ96I34 528 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 LRIG1Q96JA1 1093 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 KLHL32Q96NJ5 620 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 IL12RB2Q99665 862 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 FAM118BQ9BPY3 351 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 OSBPL1AQ9BXW6 950 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 CEP41Q9BYV8 373 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 CPEB1Q9BZB8 566 aaKnown RBP15.28■□□□□ 0.04
CD9-210ENST00000543916 BTBD1Q9H0C5 482 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 BRD8Q9H0E9 1235 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 SGK2Q9HBY8 427 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 RBM22Q9NW64 420 aaKnown RBP eCLIP15.28■□□□□ 0.04
CD9-210ENST00000543916 RAB23Q9ULC3 237 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 USP34Q70CQ2 3546 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 NUMA1Q14980 2115 aa15.28■□□□□ 0.04
CD9-210ENST00000543916 FRYLO94915 3013 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 PLXNA2O75051 1894 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 PRR23AA6NEV1 266 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 KCNK3O14649 394 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 ENC1O14682 589 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 RHOBTB1O94844 696 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 SEMA4FO95754 770 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 JCHAINP01591 159 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 LMNAP02545 664 aaKnown RBP15.27■□□□□ 0.04
CD9-210ENST00000543916 HLA-DQB2P05538 268 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 PTGER3P43115 390 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 TAS2R38P59533 333 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 AP1S1P61966 158 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 ZNF805Q5CZA5 627 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 SEL1L2Q5TEA6 688 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 LAIR1Q6GTX8 287 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 NCEH1Q6PIU2 408 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 ERN2Q76MJ5 926 aaKnown RBP15.27■□□□□ 0.04
CD9-210ENST00000543916 ASCL5Q7RTU5 278 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 CAMK1DQ8IU85 385 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 ABCA7Q8IZY2 2146 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 CNTD1Q8N815 330 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 TFB1MQ8WVM0 346 aaKnown RBP15.27■□□□□ 0.04
CD9-210ENST00000543916 HSPA12BQ96MM6 686 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 QKIQ96PU8 341 aaKnown RBP eCLIP15.27■□□□□ 0.04
CD9-210ENST00000543916 NUDCD1Q96RS6 583 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 TUBGCP5Q96RT8 1024 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 HDAC8Q9BY41 377 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 CARD9Q9H257 536 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 C6orf106Q9H6K1 298 aaPredicted RBP15.27■□□□□ 0.04
CD9-210ENST00000543916 NOD2Q9HC29 1040 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 DYRK4Q9NR20 520 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 SEPT10Q9P0V9 454 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 R3HDM2Q9Y2K5 976 aaKnown RBP15.27■□□□□ 0.04
CD9-210ENST00000543916 ATP8A1Q9Y2Q0 1164 aa15.27■□□□□ 0.04
CD9-210ENST00000543916 C16orf96A6NNT2 1141 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 SLC7A4O43246 635 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 PLRG1O43660 514 aaKnown RBP15.26■□□□□ 0.03
CD9-210ENST00000543916 ABL2P42684 1182 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 DHPSP49366 369 aaPredicted RBP15.26■□□□□ 0.03
CD9-210ENST00000543916 NEK3P51956 506 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 DSC2Q02487 901 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 IHHQ14623 411 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 GRM3Q14832 879 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 SLC45A4Q5BKX6 768 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 SPDYCQ5MJ68 293 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 ALG1LQ6GMV1 187 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 ZSWIM9Q86XI8 627 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.26■□□□□ 0.03
CD9-210ENST00000543916 OR14C36Q8NHC7 312 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 SEMA3CQ99985 751 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 POLR1EQ9GZS1 481 aaKnown RBP15.26■□□□□ 0.03
CD9-210ENST00000543916 SUV39H2Q9H5I1 410 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 ATP13A3Q9H7F0 1226 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 C10orf88Q9H8K7 445 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 SCUBE2Q9NQ36 999 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 AMACRQ9UHK6 382 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 JRKLQ9Y4A0 524 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 TTLL3Q9Y4R7 772 aa15.26■□□□□ 0.03
CD9-210ENST00000543916 TSPAN11A1L157 253 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 GOLGA6L9A6NEM1 432 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 FAM47DPA6NHR8 397 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 HACD1B0YJ81 288 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 C10orf142B7Z368 130 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 H7C0C1 242 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 SPINT1O43278 529 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 KIF5CO60282 957 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 NEBLO76041 1014 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 EPN2O95208 641 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 ADRB3P13945 408 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 PTPN3P26045 913 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 SERPINA4P29622 427 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 CXCR5P32302 372 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 MAPK8P45983 427 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 ATP5OP48047 213 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 EIF3EP60228 445 aaKnown RBP15.25■□□□□ 0.03
CD9-210ENST00000543916 BCL2L1Q07817 233 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms