RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 TRHRP34981 398 aaPredicted RBP8.98□□□□□ -0.97
VPS13D-212ENST00000543766 VHLP40337 213 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 HARS2P49590 506 aaKnown RBP8.98□□□□□ -0.97
VPS13D-212ENST00000543766 ZNF33AQ06730 810 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 PPP1R3AQ16821 1122 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 C10orf120Q5SQS8 335 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 RSBN1Q5VWQ0 802 aaPredicted RBP8.98□□□□□ -0.97
VPS13D-212ENST00000543766 MSANTD1Q6ZTZ1 278 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 MTDHQ86UE4 582 aaKnown RBP8.98□□□□□ -0.97
VPS13D-212ENST00000543766 TRIM69Q86WT6 500 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 ZNF680Q8NEM1 530 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 IL17REQ8NFR9 667 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 PHOSPHO2Q8TCD6 241 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 PPP4R1Q8TF05 950 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 EAF2Q96CJ1 260 aaPredicted RBP8.98□□□□□ -0.97
VPS13D-212ENST00000543766 FAM122AQ96E09 287 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 ZYG11BQ9C0D3 744 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 MFFQ9GZY8 342 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 OR51B6Q9H340 312 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 DPEP3Q9H4B8 488 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 CYP3A43Q9HB55 503 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 TMLHEQ9NVH6 421 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 SRRDQ9UH36 339 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 SLC6A14Q9UN76 642 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 PAPPAQ13219 1627 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 ESYT2A0FGR8 921 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 ARHGAP42A6NI28 874 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 F8VP50 259 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 H3BM21 787 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 PLK4O00444 970 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 NTRK1P04629 796 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 COX5BP10606 129 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 BMP2P12643 396 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 PCGF2P35227 344 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 PTGIRP43119 386 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 CARSP49589 748 aaKnown RBP8.98□□□□□ -0.97
VPS13D-212ENST00000543766 CDK7P50613 346 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 WDR72Q3MJ13 1102 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 COPS6Q7L5N1 327 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 FRMD5Q7Z6J6 570 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 GLIS1Q8NBF1 620 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 PRR7Q8TB68 274 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 MCOLN3Q8TDD5 553 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 TLCD1Q96CP7 247 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 MAGED4Q96JG8 741 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 ROGDIQ9GZN7 287 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 HOXD1Q9GZZ0 328 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 C1orf21Q9H246 121 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 ACTL8Q9H568 366 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 NOL11Q9H8H0 719 aaKnown RBP8.98□□□□□ -0.97
VPS13D-212ENST00000543766 DTLQ9NZJ0 730 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 TFR2Q9UP52 801 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 TBC1D30Q9Y2I9 924 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 PCDHGB2Q9Y5G2 931 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 CHD4Q14839 1912 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 PASKQ96RG2 1323 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 GLI3P10071 1580 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 SIGLEC16A6NMB1 481 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 RNF103O00237 685 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 MAGEC1O60732 1142 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 FAM13AO94988 1023 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 IGFBP1P08833 259 aaPredicted RBP8.98□□□□□ -0.97
VPS13D-212ENST00000543766 MARCKSP29966 332 aaPredicted RBP8.98□□□□□ -0.97
VPS13D-212ENST00000543766 IL15P40933 162 aaPredicted RBP8.98□□□□□ -0.97
VPS13D-212ENST00000543766 FOXK2Q01167 660 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 TSC22D1Q15714 1073 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 NIPAL1Q6NVV3 410 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 U2AF1L4Q8WU68 220 aaKnown RBP8.98□□□□□ -0.97
VPS13D-212ENST00000543766 PIK3R3Q92569 461 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 GATA6Q92908 595 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 RIT2Q99578 217 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 TTYH3Q9C0H2 523 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 RNPEPL1Q9HAU8 725 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 THEGQ9P2T0 379 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 IL19Q9UHD0 177 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 NUMBLQ9Y6R0 609 aa8.98□□□□□ -0.97
VPS13D-212ENST00000543766 A0A0U1RQK1 487 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ZNF320A2RRD8 509 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ARHGEF35A5YM69 484 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 TRMUO75648 421 aaKnown RBP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 HTR3BO95264 441 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 PRR35P0CG20 571 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 RASSF2P50749 326 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 FAM189BP81408 668 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ARHGAP8P85298 464 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ZNF844Q08AG5 666 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ALX1Q15699 326 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 GPAT3Q53EU6 434 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 KIAA0907Q7Z7F0 614 aaPredicted RBP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ASCC1Q8N9N2 400 aaKnown RBP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 PCSK9Q8NBP7 692 aaKnown RBP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 GALNT11Q8NCW6 608 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 HIPK4Q8NE63 616 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ZNF384Q8TF68 577 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 SYMPKQ92797 1274 aaKnown RBP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 PFDN5Q99471 154 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 STRA6Q9BX79 667 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 LRRC19Q9H756 370 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 CAB39LQ9H9S4 337 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ATP13A2Q9NQ11 1180 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms