RNA–Protein interactions for RNA: ENST00000543729.5

TRIM46-209, Transcript of tripartite motif containing 46, humanhuman

TSL 5 BASIC

Gene TRIM46, Length 1,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-209ENST00000543729 SF3A2Q15428 464 aaKnown RBP16.29■□□□□ 0.2
TRIM46-209ENST00000543729 SKIDA1Q1XH10 827 aa16.29■□□□□ 0.2
TRIM46-209ENST00000543729 UBAP2Q5T6F2 1119 aaKnown RBP16.29■□□□□ 0.2
TRIM46-209ENST00000543729 FAM72AQ5TYM5 149 aa16.29■□□□□ 0.2
TRIM46-209ENST00000543729 IL31Q6EBC2 164 aa16.29■□□□□ 0.2
TRIM46-209ENST00000543729 FAM72DQ6L9T8 149 aa16.29■□□□□ 0.2
TRIM46-209ENST00000543729 RFX8Q6ZV50 586 aa16.29■□□□□ 0.2
TRIM46-209ENST00000543729 C11orf74Q86VG3 221 aa16.29■□□□□ 0.2
TRIM46-209ENST00000543729 FAM72BQ86X60 149 aa16.29■□□□□ 0.2
TRIM46-209ENST00000543729 CARNMT1Q8N4J0 409 aa16.29■□□□□ 0.2
TRIM46-209ENST00000543729 ANKS4BQ8N8V4 417 aa16.29■□□□□ 0.2
TRIM46-209ENST00000543729 MDM1Q8TC05 714 aa16.29■□□□□ 0.2
TRIM46-209ENST00000543729 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.29■□□□□ 0.2
TRIM46-209ENST00000543729 IGSF8Q969P0 613 aa16.29■□□□□ 0.2
TRIM46-209ENST00000543729 CABS1Q96KC9 395 aa16.29■□□□□ 0.2
TRIM46-209ENST00000543729 MAK16Q9BXY0 300 aaKnown RBP16.29■□□□□ 0.2
TRIM46-209ENST00000543729 VPS45Q9NRW7 570 aa16.29■□□□□ 0.2
TRIM46-209ENST00000543729 PLK2Q9NYY3 685 aa16.29■□□□□ 0.2
TRIM46-209ENST00000543729 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 DRGXA6NNA5 263 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 K7EQS6 105 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 CST8O60676 142 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 RHOQP17081 205 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 GOT1P17174 413 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 STIP1P31948 543 aaKnown RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 MPLP40238 635 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 EIF2DP41214 584 aaKnown RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 HCAR3P49019 387 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 DGKEP52429 567 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 CDH4P55283 916 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 OTUD4Q01804 1114 aaKnown RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 ZNF177Q13360 481 aaPredicted RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 GAB4Q2WGN9 574 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 PREPLQ4J6C6 727 aaPredicted RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 PLA2G2CQ5R387 149 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 FYB2Q5VWT5 728 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 PPP1R21Q6ZMI0 780 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 CHST9Q7L1S5 443 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 MFN1Q8IWA4 741 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 PPIL6Q8IXY8 311 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 UHMK1Q8TAS1 419 aaKnown RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 ACTL9Q8TC94 416 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 ZNF670Q9BS34 389 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 MAGEB5Q9BZ81 275 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 DUSP15Q9H1R2 295 aaPredicted RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 RETREG1Q9H6L5 497 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 MPP6Q9NZW5 540 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 SLC24A2Q9UI40 661 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 TPRP12270 2363 aaKnown RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 IGLV3-10A0A075B6K4 115 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 SGK1O00141 431 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 LUC7L3O95232 432 aaKnown RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 PENKP01210 267 aaPredicted RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 PECAM1P16284 738 aaPredicted RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 SGSHP51688 502 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 SEC13P55735 322 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 OXCT1P55809 520 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 MRPS21P82921 87 aaKnown RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 SEMA3BQ13214 749 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 CCDC6Q16204 474 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 C5orf22Q49AR2 442 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 C2orf27AQ580R0 203 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 MANEALQ5VSG8 457 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 ARHGEF18Q6ZSZ5 1173 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 PIGWQ7Z7B1 504 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 PRCCQ92733 491 aaPredicted RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 SGSM3Q96HU1 749 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 SLC2A11Q9BYW1 496 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 DNAJC17Q9NVM6 304 aaKnown RBP16.28■□□□□ 0.2
TRIM46-209ENST00000543729 MMP17Q9ULZ9 603 aa16.28■□□□□ 0.2
TRIM46-209ENST00000543729 GFRA2O00451 464 aa16.27■□□□□ 0.19
TRIM46-209ENST00000543729 MCF2LO15068 1137 aa16.27■□□□□ 0.19
TRIM46-209ENST00000543729 HOXD9P28356 352 aaPredicted RBP16.27■□□□□ 0.19
TRIM46-209ENST00000543729 OR1E1P30953 314 aa16.27■□□□□ 0.19
TRIM46-209ENST00000543729 DPYSL3Q14195 570 aa16.27■□□□□ 0.19
TRIM46-209ENST00000543729 HSF5Q4G112 596 aaPredicted RBP16.27■□□□□ 0.19
TRIM46-209ENST00000543729 USP39Q53GS9 565 aaKnown RBP16.27■□□□□ 0.19
TRIM46-209ENST00000543729 LACTB2Q53H82 288 aaPredicted RBP16.27■□□□□ 0.19
TRIM46-209ENST00000543729 CCDC121Q6ZUS5 278 aa16.27■□□□□ 0.19
TRIM46-209ENST00000543729 TFAP2DQ7Z6R9 452 aa16.27■□□□□ 0.19
TRIM46-209ENST00000543729 CIR1Q86X95 450 aaPredicted RBP16.27■□□□□ 0.19
TRIM46-209ENST00000543729 ZNF683Q8IZ20 524 aa16.27■□□□□ 0.19
TRIM46-209ENST00000543729 NAT16Q8N8M0 369 aa16.27■□□□□ 0.19
TRIM46-209ENST00000543729 CCDC197Q8NCU1 140 aa16.27■□□□□ 0.19
TRIM46-209ENST00000543729 CSPG4P5Q96PW8 444 aa16.27■□□□□ 0.19
TRIM46-209ENST00000543729 FAM118BQ9BPY3 351 aa16.27■□□□□ 0.19
TRIM46-209ENST00000543729 FRMD8Q9BZ67 464 aaPredicted RBP16.27■□□□□ 0.19
TRIM46-209ENST00000543729 SAYSD1Q9NPB0 183 aa16.27■□□□□ 0.19
TRIM46-209ENST00000543729 SAMD15Q9P1V8 674 aa16.27■□□□□ 0.19
TRIM46-209ENST00000543729 DEC1Q9P2X7 70 aa16.27■□□□□ 0.19
TRIM46-209ENST00000543729 TMEM120BA0PK00 339 aa16.26■□□□□ 0.19
TRIM46-209ENST00000543729 E7ESA3 106 aa16.26■□□□□ 0.19
TRIM46-209ENST00000543729 CACNG3O60359 315 aa16.26■□□□□ 0.19
TRIM46-209ENST00000543729 APODP05090 189 aa16.26■□□□□ 0.19
TRIM46-209ENST00000543729 PHBP35232 272 aa16.26■□□□□ 0.19
TRIM46-209ENST00000543729 MAPKAPK2P49137 400 aa16.26■□□□□ 0.19
TRIM46-209ENST00000543729 QPCTQ16769 361 aa16.26■□□□□ 0.19
TRIM46-209ENST00000543729 ALFQ53S48 1182 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms