RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 BCAP31P51572 246 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 CDH8P55286 799 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 HTRA3P83110 453 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 FGL2Q14314 439 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 TSC22D1Q15714 1073 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 KCNT1Q5JUK3 1230 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 PDZK1Q5T2W1 519 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 HECTD3Q5T447 861 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 KIAA0319Q5VV43 1072 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 MTDHQ86UE4 582 aaKnown RBP7.89□□□□□ -1.15
VPS13D-211ENST00000543710 TMEM126BQ8IUX1 230 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.89□□□□□ -1.152e-6■■■■■ 34.8
VPS13D-211ENST00000543710 C7orf57Q8NEG2 295 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 ADCY4Q8NFM4 1077 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 DNAJB3Q8WWF6 145 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 POPDC2Q9HBU9 364 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 SETD4Q9NVD3 440 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 SUCOQ9UBS9 1254 aaKnown RBP7.89□□□□□ -1.15
VPS13D-211ENST00000543710 AFF4Q9UHB7 1163 aaKnown RBP7.89□□□□□ -1.15
VPS13D-211ENST00000543710 DAPK2Q9UIK4 370 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 ASB3Q9Y575 518 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 UNC5CO95185 931 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 EPN2O95208 641 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 IDO1P14902 403 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 ETS1P14921 441 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 ACOT2P49753 483 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 MICU2Q8IYU8 434 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 FBXO39Q8N4B4 442 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 TOP6BLQ8N6T0 577 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 BLOC1S5Q8TDH9 187 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 C9orf72Q96LT7 481 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 FAM126AQ9BYI3 521 aaPredicted RBP7.89□□□□□ -1.15
VPS13D-211ENST00000543710 ZNF576Q9H609 170 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 CAAP1Q9H8G2 361 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 WDR41Q9HAD4 459 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 RAP2CQ9Y3L5 183 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 FYNP06241 537 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 WEE1P30291 646 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 NTSP30990 170 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 KLK7P49862 253 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 ZNF143P52747 638 aaPredicted RBP7.89□□□□□ -1.15
VPS13D-211ENST00000543710 HERC3Q15034 1050 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 ANGPT1Q15389 498 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 STXBP5Q5T5C0 1151 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 N4BP2L1Q5TBK1 243 aaPredicted RBP7.89□□□□□ -1.15
VPS13D-211ENST00000543710 POTEHQ6S545 545 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 SYTL1Q8IYJ3 562 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 CELF4Q9BZC1 486 aaKnown RBP7.89□□□□□ -1.15
VPS13D-211ENST00000543710 RNPEPL1Q9HAU8 725 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 SPAG4Q9NPE6 437 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 TLR9Q9NR96 1032 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 CATSPERZQ9NTU4 200 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 SOHLH2Q9NX45 425 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 CDH9Q9ULB4 789 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 C10orf71Q711Q0 1435 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 LAMB4A4D0S4 1761 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 A0A0A0MRY4 1105 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 NR5A2O00482 541 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 LIASO43766 372 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 KRT34O76011 436 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 TRUB2O95900 331 aaKnown RBP7.89□□□□□ -1.15
VPS13D-211ENST00000543710 LBPP18428 481 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 ATP6V1C1P21283 382 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 BGNP21810 368 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 DPYSL3Q14195 570 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 BRMS1LQ5PSV4 323 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 RBM20Q5T481 1227 aaKnown RBP7.89□□□□□ -1.15
VPS13D-211ENST00000543710 MOB2Q70IA6 237 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 PAGE2Q7Z2X7 111 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 DHRSXQ8N5I4 330 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 USP7Q93009 1102 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 SPATA13Q96N96 652 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 FAIM2Q9BWQ8 316 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 URADA6NGE7 173 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 ACKR2O00590 384 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 FTH1P02794 183 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 ERCC2P18074 760 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 RPL21P46778 160 aaKnown RBP7.89□□□□□ -1.15
VPS13D-211ENST00000543710 CLK3P49761 638 aaKnown RBP7.89□□□□□ -1.15
VPS13D-211ENST00000543710 LAMTOR4Q0VGL1 99 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 ARHGAP17Q68EM7 881 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 BICRALQ6AI39 1079 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 GPR135Q8IZ08 494 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 CXorf40AQ8TE69 158 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 EZH1Q92800 747 aaPredicted RBP7.89□□□□□ -1.15
VPS13D-211ENST00000543710 TOP1MTQ969P6 601 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 SIK2Q9H0K1 926 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 RETREG1Q9H6L5 497 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 INTS13Q9NVM9 706 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 ARHGAP20Q9P2F6 1191 aa7.89□□□□□ -1.15
VPS13D-211ENST00000543710 GRIN2DO15399 1336 aa7.88□□□□□ -1.15
VPS13D-211ENST00000543710 FOXN3O00409 490 aaPredicted RBP7.88□□□□□ -1.15
VPS13D-211ENST00000543710 FCHO1O14526 889 aa7.88□□□□□ -1.15
VPS13D-211ENST00000543710 SHOX2O60902 331 aaPredicted RBP7.88□□□□□ -1.15
VPS13D-211ENST00000543710 TULP3O75386 442 aa7.88□□□□□ -1.15
VPS13D-211ENST00000543710 HMBSP08397 361 aa7.88□□□□□ -1.15
VPS13D-211ENST00000543710 ALDH5A1P51649 535 aaPredicted RBP7.88□□□□□ -1.15
VPS13D-211ENST00000543710 UBE3AQ05086 875 aa7.88□□□□□ -1.15
VPS13D-211ENST00000543710 XKR4Q5GH76 650 aa7.88□□□□□ -1.15
VPS13D-211ENST00000543710 DGKKQ5KSL6 1271 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms