RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 UBASH3AP57075 661 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 CLDN2P57739 230 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 YPEL5P62699 121 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 POLR2LP62875 67 aaKnown RBP7.26□□□□□ -1.25
NUP43-206ENST00000543637 CYP4F3Q08477 520 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 ZNF211Q13398 564 aaPredicted RBP7.26□□□□□ -1.25
NUP43-206ENST00000543637 SERINC3Q13530 473 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 SHBQ15464 509 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 NFKBIBQ15653 356 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 SMAD1Q15797 465 aaKnown RBP7.26□□□□□ -1.25
NUP43-206ENST00000543637 TDRD12Q587J7 1177 aaKnown RBP7.26□□□□□ -1.25
NUP43-206ENST00000543637 FAXCQ5TGI0 409 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 SEL1L3Q68CR1 1132 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 ABI3BPQ7Z7G0 1075 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 PROSER1Q86XN7 944 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 DNAAF5Q86Y56 855 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 UMODL1-AS1Q8N2C9 162 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 LZTR1Q8N653 840 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 OR13H1Q8NG92 308 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 MDM1Q8TC05 714 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 HCAR2Q8TDS4 363 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 NSMCE1Q8WV22 266 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 GLMNQ92990 594 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 ZNF653Q96CK0 615 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 IQCDQ96DY2 449 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 BMFQ96LC9 184 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 IL12RB2Q99665 862 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 SUV39H2Q9H5I1 410 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 ZWILCHQ9H900 591 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 TOR4AQ9NXH8 423 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 ZNF212Q9UDV6 495 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 CNOT8Q9UFF9 292 aaKnown RBP7.26□□□□□ -1.25
NUP43-206ENST00000543637 PCSK1NQ9UHG2 260 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 AP4E1Q9UPM8 1137 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 DOLKQ9UPQ8 538 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 ZFR2Q9UPR6 939 aaKnown RBP7.26□□□□□ -1.25
NUP43-206ENST00000543637 CA5BQ9Y2D0 317 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 MFHAS1Q9Y4C4 1052 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 ACTL7AQ9Y615 435 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 SHROOM3Q8TF72 1996 aa7.26□□□□□ -1.25
NUP43-206ENST00000543637 LRRK1Q38SD2 2015 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 SPTY2D1-AS1A0A0U1RR47 76 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 A0A1B0GTH6 734 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 TCRBV5S1A1TA0A578 114 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 FAM149AA5PLN7 773 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 TMEM191CA6NGB0 347 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 C10orf142B7Z368 130 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 DFFAO00273 331 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 FFAR2O15552 330 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 SIGLEC6O43699 453 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 LZTS3O60299 673 aaPredicted RBP7.25□□□□□ -1.25
NUP43-206ENST00000543637 MMP20O60882 483 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 DKK1O94907 266 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 CD160O95971 181 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 TPM3P06753 285 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 SKILP12757 684 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 CTSEP14091 401 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 JUNDP17535 347 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 ACP1P24666 158 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 HTR1BP28222 390 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 GKP32189 559 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 PRKCIP41743 596 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 HCAR3P49019 387 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 RPIAP49247 311 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 PAPOLAP51003 745 aaKnown RBP7.25□□□□□ -1.25
NUP43-206ENST00000543637 BLKP51451 505 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 BCL2L1Q07817 233 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 TARDBPQ13148 414 aaKnown RBP eCLIP7.25□□□□□ -1.25
NUP43-206ENST00000543637 MAMLD1Q13495 774 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 PDE1CQ14123 709 aaPredicted RBP7.25□□□□□ -1.25
NUP43-206ENST00000543637 PIGHQ14442 188 aaPredicted RBP7.25□□□□□ -1.25
NUP43-206ENST00000543637 NR1I3Q14994 352 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 CYTH1Q15438 398 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 TSR1Q2NL82 804 aaKnown RBP7.25□□□□□ -1.25
NUP43-206ENST00000543637 TMEM259Q4ZIN3 620 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 BOLA3Q53S33 107 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 PPP6R3Q5H9R7 873 aaPredicted RBP7.25□□□□□ -1.25
NUP43-206ENST00000543637 FIGNQ5HY92 759 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 PPP1R15BQ5SWA1 713 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 ATXN7L2Q5T6C5 722 aaPredicted RBP7.25□□□□□ -1.25
NUP43-206ENST00000543637 TMCO4Q5TGY1 634 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 PLEKHA7Q6IQ23 1121 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 ERAP2Q6P179 960 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 KYAT3Q6YP21 454 aaKnown RBP7.25□□□□□ -1.25
NUP43-206ENST00000543637 LRRC69Q6ZNQ3 347 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 PARS2Q7L3T8 475 aaKnown RBP7.25□□□□□ -1.25
NUP43-206ENST00000543637 APTXQ7Z2E3 356 aaKnown RBP7.25□□□□□ -1.25
NUP43-206ENST00000543637 PSTKQ8IV42 348 aaKnown RBP7.25□□□□□ -1.25
NUP43-206ENST00000543637 BBS5Q8N3I7 341 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 TMEM145Q8NBT3 493 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 DENND6BQ8NEG7 585 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 OR6K2Q8NGY2 324 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 OR4C6Q8NH72 309 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 ATL2Q8NHH9 583 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 CPLX3Q8WVH0 158 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 SCG3Q8WXD2 468 aaKnown RBP7.25□□□□□ -1.25
NUP43-206ENST00000543637 BAP1Q92560 729 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 HMCESQ96FZ2 354 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 ZNF641Q96N77 438 aaPredicted RBP7.25□□□□□ -1.25
NUP43-206ENST00000543637 NAP1L5Q96NT1 182 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms