RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 NADKO95544 446 aaPredicted RBP19.54■□□□□ 0.72
SUDS3-204ENST00000543473 CTBP1Q13363 440 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 UGCGQ16739 394 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 PPM1JQ5JR12 505 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 IL27RAQ6UWB1 636 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 MILR1Q7Z6M3 343 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 WDR12Q9GZL7 423 aaKnown RBP19.54■□□□□ 0.72
SUDS3-204ENST00000543473 NFICP08651 508 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 ALOX5P09917 674 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 TUBP50607 506 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 PLCL1Q15111 1095 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 NT5DC4Q86YG4 428 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 CAMKK2Q96RR4 588 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 SFMBT1Q9UHJ3 866 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 MGAT4DA6NG13 374 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 IFNA14P01570 189 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 TIMM50Q3ZCQ8 353 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 TKTL2Q9H0I9 626 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 CXorf21Q9HAI6 301 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.53■□□□□ 0.72
SUDS3-204ENST00000543473 PAPSS1O43252 624 aaPredicted RBP19.53■□□□□ 0.72
SUDS3-204ENST00000543473 LYPLA2O95372 231 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 SLC18A1P54219 525 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 ZNF177Q13360 481 aaPredicted RBP19.53■□□□□ 0.72
SUDS3-204ENST00000543473 EMC10Q5UCC4 262 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 F5H5T6 163 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 IDH3BO43837 385 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 SCNN1BP51168 640 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 TYW3Q6IPR3 259 aaKnown RBP19.53■□□□□ 0.72
SUDS3-204ENST00000543473 ADCK2Q7Z695 626 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 KRT73Q86Y46 540 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 STAG3L4Q8TBR4 150 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 TPD52L3Q96J77 140 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 TEKT5Q96M29 485 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 EHD3Q9NZN3 535 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 NUDT5Q9UKK9 219 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 ROBO1Q9Y6N7 1651 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 DBTP11182 482 aaKnown RBP19.53■□□□□ 0.72
SUDS3-204ENST00000543473 PAN2Q504Q3 1202 aaKnown RBP19.53■□□□□ 0.72
SUDS3-204ENST00000543473 ATG14Q6ZNE5 492 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 UTS2BQ765I0 119 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 ZNF605Q86T29 641 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 TLK2Q86UE8 772 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 P2RY11Q96G91 374 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 EBF4Q9BQW3 602 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 PCDHB8Q9UN66 801 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 FAM50BQ9Y247 325 aa19.53■□□□□ 0.72
SUDS3-204ENST00000543473 AFDNP55196 1824 aaKnown RBP19.53■□□□□ 0.72
SUDS3-204ENST00000543473 IRF1P10914 325 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 TPSB2P20231 275 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 PRDX6P30041 224 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 TPSAB1Q15661 275 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 PLD5Q8N7P1 536 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 PCSK9Q8NBP7 692 aaKnown RBP19.52■□□□□ 0.72
SUDS3-204ENST00000543473 DNAJB3Q8WWF6 145 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 ZMYM5Q9UJ78 669 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 FBXO5Q9UKT4 447 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 TIMM13Q9Y5L4 95 aaPredicted RBP19.52■□□□□ 0.72
SUDS3-204ENST00000543473 ADAMTSL3P82987 1691 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 ITGALP20701 1170 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 CLCN5P51795 746 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 EFEMP1Q12805 493 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 SLC51AQ86UW1 340 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 TMEM132CQ8N3T6 1108 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 ZNF540Q8NDQ6 660 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 CPXM1Q96SM3 734 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 REEP1Q9H902 201 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 OR12D3Q9UGF7 316 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 SLIT2O94813 1529 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 TALDO1P37837 337 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 ZNF135P52742 658 aaPredicted RBP19.52■□□□□ 0.72
SUDS3-204ENST00000543473 ZFAND2BQ8WV99 257 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 COPS5Q92905 334 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 MCRS1Q96EZ8 462 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 PIDD1Q9HB75 910 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 PPM1HQ9ULR3 514 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 KCPQ6ZWJ8 1503 aa19.52■□□□□ 0.72
SUDS3-204ENST00000543473 KCNH1O95259 989 aa19.52■□□□□ 0.71
SUDS3-204ENST00000543473 MLNP12872 115 aa19.52■□□□□ 0.71
SUDS3-204ENST00000543473 S100A3P33764 101 aa19.52■□□□□ 0.71
SUDS3-204ENST00000543473 CHI3L1P36222 383 aaPredicted RBP19.52■□□□□ 0.71
SUDS3-204ENST00000543473 IDH3AP50213 366 aa19.52■□□□□ 0.71
SUDS3-204ENST00000543473 OXCT1P55809 520 aa19.52■□□□□ 0.71
SUDS3-204ENST00000543473 SH3BP5LQ7L8J4 393 aa19.52■□□□□ 0.71
SUDS3-204ENST00000543473 TBC1D21Q8IYX1 336 aa19.52■□□□□ 0.71
SUDS3-204ENST00000543473 CNTD1Q8N815 330 aa19.52■□□□□ 0.71
SUDS3-204ENST00000543473 NLGN2Q8NFZ4 835 aa19.52■□□□□ 0.71
SUDS3-204ENST00000543473 ULBP1Q9BZM6 244 aa19.52■□□□□ 0.71
SUDS3-204ENST00000543473 LHX5Q9H2C1 402 aa19.52■□□□□ 0.71
SUDS3-204ENST00000543473 ACSS2Q9NR19 701 aa19.52■□□□□ 0.71
SUDS3-204ENST00000543473 GMPPBQ9Y5P6 360 aa19.52■□□□□ 0.71
SUDS3-204ENST00000543473 GNG14A0A1W2PPG7 69 aa19.51■□□□□ 0.71
SUDS3-204ENST00000543473 HALP42357 657 aa19.51■□□□□ 0.71
SUDS3-204ENST00000543473 SLC11A2P49281 568 aa19.51■□□□□ 0.71
SUDS3-204ENST00000543473 ARL13AQ5H913 290 aaPredicted RBP19.51■□□□□ 0.71
SUDS3-204ENST00000543473 ANKS3Q6ZW76 656 aa19.51■□□□□ 0.71
SUDS3-204ENST00000543473 CLYBLQ8N0X4 340 aa19.51■□□□□ 0.71
SUDS3-204ENST00000543473 NETO2Q8NC67 525 aa19.51■□□□□ 0.71
SUDS3-204ENST00000543473 TSEN34Q9BSV6 310 aaKnown RBP19.51■□□□□ 0.71
SUDS3-204ENST00000543473 RHOJQ9H4E5 214 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms