RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 CELF5Q8N6W0 485 aaKnown RBP5.28□□□□□ -1.56
CLIP1-217ENST00000543205 PCYOX1LQ8NBM8 494 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 RNF139Q8WU17 664 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 ELSPBP1Q96BH3 223 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 KXD1Q9BQD3 176 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 TRIM62Q9BVG3 475 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 ABCG4Q9H172 646 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 DEF6Q9H4E7 631 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 ACSS3Q9H6R3 686 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 NMUR1Q9HB89 426 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 TRPV4Q9HBA0 871 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 ABCC13Q9NSE7 274 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 OLA1Q9NTK5 396 aaKnown RBP5.28□□□□□ -1.56
CLIP1-217ENST00000543205 ABHD10Q9NUJ1 306 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 TDP1Q9NUW8 608 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.28□□□□□ -1.56
CLIP1-217ENST00000543205 OSER1Q9NX31 292 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 IGSF9Q9P2J2 1179 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 CORO2BQ9UQ03 480 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 NUMBLQ9Y6R0 609 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 PTPRDP23468 1912 aa5.28□□□□□ -1.56
CLIP1-217ENST00000543205 BRWD1Q9NSI6 2320 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 C2orf16Q68DN1 1984 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 HEPACAM2A8MVW5 462 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 ANHXE9PGG2 379 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 FAM227AF5H4B4 570 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 GOLGA8SH3BPF8 625 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 PAPSS1O43252 624 aaPredicted RBP5.27□□□□□ -1.57
CLIP1-217ENST00000543205 ECI2O75521 394 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 PLEKP08567 350 aaPredicted RBP5.27□□□□□ -1.57
CLIP1-217ENST00000543205 MMP8P22894 467 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 VIPR2P41587 438 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 GPR3P46089 330 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 GABRB2P47870 512 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 DCAF7P61962 342 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 YWHAZP63104 245 aaKnown RBP5.27□□□□□ -1.57
CLIP1-217ENST00000543205 SLC7A9P82251 487 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 SLC6A3Q01959 620 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 EFEMP1Q12805 493 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 HTR4Q13639 388 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 ZNF268Q14587 947 aaPredicted RBP5.27□□□□□ -1.57
CLIP1-217ENST00000543205 FAM209BQ5JX69 171 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 FAM102AQ5T9C2 384 aaPredicted RBP5.27□□□□□ -1.57
CLIP1-217ENST00000543205 CDCP2Q5VXM1 449 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 TANGO2Q6ICL3 276 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 KLHDC10Q6PID8 442 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 OLFML1Q6UWY5 402 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 BEND4Q6ZU67 534 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 FAM47EQ6ZV65 393 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 FAM183BPQ6ZVS7 135 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 PHF13Q86YI8 300 aaPredicted RBP5.27□□□□□ -1.57
CLIP1-217ENST00000543205 MIB1Q86YT6 1006 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 ZNF276Q8N554 614 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 CAMKK1Q8N5S9 505 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 SPC24Q8NBT2 197 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 MGARPQ8TDB4 240 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 RSAD2Q8WXG1 361 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 ANP32BQ92688 251 aaKnown RBP5.27□□□□□ -1.57
CLIP1-217ENST00000543205 FGF14Q92915 247 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 RADILQ96JH8 1075 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 CCDC42Q96M95 316 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 SLC22A12Q96S37 553 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 C11orf70Q9BRQ4 267 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 DESI2Q9BSY9 194 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 SYT11Q9BT88 431 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 FAM167BQ9BTA0 163 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 UNKQ9C0B0 810 aaKnown RBP5.27□□□□□ -1.57
CLIP1-217ENST00000543205 SEMA6CQ9H3T2 930 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 EPHX3Q9H6B9 360 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 KIF9Q9HAQ2 790 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 KCNK12Q9HB15 430 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 POPDC2Q9HBU9 364 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 ASNSD1Q9NWL6 643 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 SMPD4Q9NXE4 827 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 ADAM22Q9P0K1 906 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 WDR35Q9P2L0 1181 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 IMPACTQ9P2X3 320 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 TJP2Q9UDY2 1190 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 KLHL3Q9UH77 587 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 RASAL2Q9UJF2 1139 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 NUDT5Q9UKK9 219 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 ITGB1BP2Q9UKP3 347 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 ARHGAP26Q9UNA1 814 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 CPQQ9Y646 472 aa5.27□□□□□ -1.57
CLIP1-217ENST00000543205 MYH10P35580 1976 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 FAM95CA0A1B0GW59 222 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 SLC12A8A0AV02 714 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 A6NLC8 198 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 LEFTY2O00292 366 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 DDX3XO00571 662 aaKnown RBP eCLIP5.26□□□□□ -1.57
CLIP1-217ENST00000543205 AKR1B10O60218 316 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 MAFKO60675 156 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 HSF2BPO75031 334 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 RTN2O75298 545 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 ULK1O75385 1050 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 GRAP2O75791 330 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 PRAMEF12O95522 483 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 OLFM2O95897 454 aa5.26□□□□□ -1.57
CLIP1-217ENST00000543205 FTLP02792 175 aaPredicted RBP5.26□□□□□ -1.57
CLIP1-217ENST00000543205 GLI1P08151 1106 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms