RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 PTPN9P43378 593 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 AGTR2P50052 363 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 GNAQP50148 359 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 HNRNPMP52272 730 aaKnown RBP eCLIP4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 SHC2P98077 582 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 ITIH3Q06033 890 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 AP1B1Q10567 949 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 SLMAPQ14BN4 828 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 FBXO43Q4G163 708 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 ZNF618Q5T7W0 954 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 SERTAD4-AS1Q5TG53 156 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 DENND2CQ68D51 928 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 TRAT1Q6PIZ9 186 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 GLDNQ6ZMI3 551 aaPredicted RBP4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 GLRX5Q86SX6 157 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 TMEM200AQ86VY9 491 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 LAS2Q8IYD9 372 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 MINDY1Q8N5J2 469 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 SPC24Q8NBT2 197 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 DNAAF1Q8NEP3 725 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 MOSPD2Q8NHP6 518 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 KIF18AQ8NI77 898 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 AKAP1Q92667 903 aaKnown RBP eCLIP4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 FAM162AQ96A26 154 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 FKBP10Q96AY3 582 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 FER1L6-AS2Q96M78 137 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 C8orf49Q96NF6 230 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 GNRHR2Q96P88 292 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 DGAT2Q96PD7 388 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 FYTTD1Q96QD9 318 aaKnown RBP4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 PAFAH2Q99487 392 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 RNF26Q9BY78 433 aaPredicted RBP4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 GLIS2Q9BZE0 524 aaPredicted RBP4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 MEGF9Q9H1U4 602 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 SFXN1Q9H9B4 322 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 OGFRQ9NZT2 677 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 CCNL1Q9UK58 526 aaPredicted RBP4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 GABRQQ9UN88 632 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 SH2B3Q9UQQ2 575 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 SLC30A1Q9Y6M5 507 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 AOX1Q06278 1338 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 DHX57Q6P158 1386 aaKnown RBP4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 NPATQ14207 1427 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 CNTLNQ9NXG0 1405 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 TCOF1Q13428 1488 aaKnown RBP4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 RAPGEF2Q9Y4G8 1499 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 MARCH11A6NNE9 402 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 CHL1O00533 1208 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 HS6ST1O60243 411 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 FMO6PO60774 539 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 NDUFS3O75489 264 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 RAD17O75943 681 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 C22orf31O95567 290 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 ONECUT2O95948 504 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 C1RP00736 705 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 ADAP00813 363 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 DLDP09622 509 aaKnown RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 IRF1P10914 325 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 PTAFRP25105 342 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 CTGFP29279 349 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 TYK2P29597 1187 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 MCM7P33993 719 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 STAT6P42226 847 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 PIP4K2AP48426 406 aaPredicted RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 DIO1P49895 249 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 CAMPP49913 170 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 BLKP51451 505 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 PDE1AP54750 535 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 EPHB4P54760 987 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 F2RL1P55085 397 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 NXPH1P58417 271 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 GPC5P78333 572 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 CYP4A11Q02928 519 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 HHEXQ03014 270 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 IKQ13123 557 aaPredicted RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 SNTB1Q13884 538 aaKnown RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 RUNX2Q13950 521 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 C15orf59Q2T9L4 293 aaPredicted RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 EDRF1Q3B7T1 1238 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 ZSCAN23Q3MJ62 389 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 TTC31Q49AM3 519 aaPredicted RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 CRY2Q49AN0 593 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 SLFN13Q68D06 897 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 CAVIN1Q6NZI2 390 aaKnown RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 IL20RBQ6UXL0 311 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 MOB3CQ70IA8 216 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 SDCCAG8Q86SQ7 713 aaPredicted RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 GPAT4Q86UL3 456 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 HSCBQ8IWL3 235 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 LGI4Q8N135 537 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 CCAR2Q8N163 923 aaKnown RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 MYCBPAPQ8TBZ2 947 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 LPIN2Q92539 896 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 MRPS27Q92552 414 aaKnown RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 ZKSCAN4Q969J2 545 aaPredicted RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 TMCO6Q96DC7 493 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 CCDC43Q96MW1 224 aaKnown RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 GPR78Q96P69 363 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 SPAG5Q96R06 1193 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 SNX18Q96RF0 628 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms