RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 FILIP1LQ4L180 1135 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 HES3Q5TGS1 186 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 SCYL2Q6P3W7 929 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 Q6ZSR6 202 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 TMC6Q7Z403 805 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 PARGQ86W56 976 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 PYROXD2Q8N2H3 581 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 SLC25A45Q8N413 288 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 OR6K2Q8NGY2 324 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 C1QTNF2Q9BXJ5 285 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 MAGEB5Q9BZ81 275 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 TTYH3Q9C0H2 523 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 USP29Q9HBJ7 922 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 PARVAQ9NVD7 372 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 EVA1BQ9NVM1 165 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 NLGN3Q9NZ94 848 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 DKK3Q9UBP4 350 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 LHX6Q9UPM6 363 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 CELSR3Q9NYQ7 3312 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 SPTY2D1-AS1A0A0U1RR47 76 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 LRRC53A6NM62 1247 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 RASA4BC9J798 803 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 H3BM21 787 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 FPGTO14772 594 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 AREL1O15033 823 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 SPINT1O43278 529 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 RASA4O43374 803 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 SIGLEC6O43699 453 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 CREB3O43889 395 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 JUPP14923 745 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 NME1P15531 152 aaKnown RBP15.85■□□□□ 0.13
VPS33A-206ENST00000542310 TNFAIP3P21580 790 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 PRKCIP41743 596 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 TPI1P60174 286 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 RHOAP61586 193 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 SGCGQ13326 291 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 MAMLD1Q13495 774 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 GRM3Q14832 879 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 PLEKHA7Q6IQ23 1121 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 GDPD4Q6W3E5 623 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 ZNF354CQ86Y25 554 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 FNIP1Q8TF40 1166 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 HMCESQ96FZ2 354 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 BMFQ96LC9 184 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 KLF6Q99612 283 aaPredicted RBP15.85■□□□□ 0.13
VPS33A-206ENST00000542310 DUSP23Q9BVJ7 150 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 C1QTNF7Q9BXJ2 289 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 ZFYVE26Q68DK2 2539 aa15.85■□□□□ 0.13
VPS33A-206ENST00000542310 POM121BA6NF01 834 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 NEMP2A6NFY4 417 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 TRIM38O00635 465 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 NEMP1O14524 444 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 TOR1BO14657 336 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 RAD51BO15315 384 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 TEX33O43247 280 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 PAK4O96013 591 aaPredicted RBP15.84■□□□□ 0.13
VPS33A-206ENST00000542310 CSF2P04141 144 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 GZMAP12544 262 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 GKP32189 559 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 ZNF135P52742 658 aaPredicted RBP15.84■□□□□ 0.13
VPS33A-206ENST00000542310 NDST2P52849 883 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 E2F1Q01094 437 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 OGDHQ02218 1023 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 CYP4F3Q08477 520 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 FZD2Q14332 565 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 ASIC2Q16515 512 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 ATXN7L2Q5T6C5 722 aaPredicted RBP15.84■□□□□ 0.13
VPS33A-206ENST00000542310 MARCH9Q86YJ5 346 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 PSTKQ8IV42 348 aaKnown RBP15.84■□□□□ 0.13
VPS33A-206ENST00000542310 FAM181AQ8N9Y4 354 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 HCAR2Q8TDS4 363 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 KLHL32Q96NJ5 620 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 CPEB1Q9BZB8 566 aaKnown RBP15.84■□□□□ 0.13
VPS33A-206ENST00000542310 NRSN2Q9GZP1 204 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 LRRC19Q9H756 370 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 PDFQ9HBH1 243 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 UCKL1Q9NWZ5 548 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 TAS2R14Q9NYV8 317 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 AIPL1Q9NZN9 384 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 UBA2Q9UBT2 640 aaPredicted RBP15.84■□□□□ 0.13
VPS33A-206ENST00000542310 AP4E1Q9UPM8 1137 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 RAXQ9Y2V3 346 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 CSNK1G3Q9Y6M4 447 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 CACNA1GO43497 2377 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 LRP4O75096 1905 aa15.84■□□□□ 0.13
VPS33A-206ENST00000542310 URB1O60287 2271 aaKnown RBP15.83■□□□□ 0.13
VPS33A-206ENST00000542310 A0A1B0GTH6 734 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 TSPAN11A1L157 253 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 IGLON5A6NGN9 336 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 SCAMP1O15126 338 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 GP1BAP07359 652 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 GIMD1P0DJR0 217 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 CKMT1AP12532 417 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 PSMA2P25787 234 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 PFN3P60673 137 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 DAB2P98082 770 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 RTP5Q14D33 572 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 LEKR1Q6ZMV7 388 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 DNAAF5Q86Y56 855 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 ZNF548Q8NEK5 533 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms